HHsearch alignment for GI: 254780458 and conserved domain: TIGR01072
>TIGR01072 murA UDP-N-acetylglucosamine 1-carboxyvinyltransferase; InterPro: IPR005750 The bacterial enzyme UDP-N-acetylglucosamine (UDP-GlcNAc) enolpyruvyltransferase (MurA) catalyzes the transfer of enolpyruvate from phosphoenolpyruvate to uridine diphospho-N-acetylglucosamine, which is the first committed step of bacterial cell wall biosynthesis. Experimental evidence suggests that binding of substrates to the enzyme does not exclusively follow an ordered mechanism with UDP-GlcNAc binding first, although binding of UDP-GlcNAc to free enzyme is preferred and possibly influenced by pyruvate-P. The reaction thus appears to follow an induced-fit mechanism, in which the binding site for fosfomycin, and presumably also for pyruvate-P, is created by the interaction of free enzyme with the sugar nucleotide. ; GO: 0016740 transferase activity, 0019277 UDP-N-acetylgalactosamine biosynthetic process.
Probab=99.92 E-value=4.8e-25 Score=179.06 Aligned_cols=326 Identities=21% Similarity=0.287 Sum_probs=235.1
Q ss_pred EEECCCCHHHHHHH--HHHHH-HCC-CC-EEEEC---CC-CHHHHHHHHHHHHHCCCEEEEECCEEEEEECCCCCCCCCC
Q ss_conf 99818422289999--99997-449-84-99977---98-0289999999999849799998998999812688756853
Q gi|254780458|r 21 TICIPGDRSLSHFS--IILGG-IAA-GE-TQIRG---VL-ESDDVLNTMRMMHYLGARFTKKDREWIVQGVGNGCLLSPE 91 (449)
Q Consensus 21 ~i~vp~SKs~s~Ra--Ll~Aa-La~-g~-s~i~n---~~-~s~Dv~~~l~al~~LG~~i~~~~~~~~i~g~g~~~~~~~~ 91 (449)
T Consensus 82 ~~~apy~~V~kmRASilvLGPLLaR~g~Ga~V~LPGGCaIG~RPvD~H~~gL~~lGA~i~~~~G~v~A~~~~-~~L~G~~ 160 (443)
T TIGR01072 82 KTEAPYELVRKMRASILVLGPLLARFGKGAKVSLPGGCAIGARPVDLHLKGLEALGAEITIEDGYVVASAEG-GRLKGAH 160 (443)
T ss_pred CEECCHHHHHHHCHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCEEEEEECC-CCCCEEE
T ss_conf 210797997540404877628976268863726888873579976688998985598999816399998508-9622158
Q ss_pred CEEEECCCCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCEEECCCCCCCCEEECCCC-CCCEEEEEC
Q ss_conf 1055033333220013431455310331233333446542101012312741010134322201202221-111134302
Q gi|254780458|r 92 YPLDFKGFDMGYGLMMGVVGVYDFQTFFKGRAEILQPTIESLLAPLYQMGVQVKLPEDKRLPLVLHGPRT-PNPIVYKSP 170 (449)
Q Consensus 92 ~~i~~~~sgt~~r~l~~~l~~~~~~~~i~G~~~l~~Rpi~~li~~L~~lGa~i~~~~~~~~Pi~I~g~~~-~~~~~~~~~ 170 (449)
T Consensus 161 i~lD~~SVGATEN~~mA-A~LAeG~Tvi~NaA~--EPEivDL~~~L~~mGA~I~G~G~~~--i~I~GV~~~L~g~~h~ii 235 (443)
T TIGR01072 161 IVLDKVSVGATENIIMA-AVLAEGTTVIENAAR--EPEIVDLCEFLNKMGAKIEGAGSST--ITIEGVEKDLHGTEHSII 235 (443)
T ss_pred EECCCCCCCHHHHHHHH-HHHCCCCEEEEEECC--CCCHHHHHHHHHHCCCEEEEECCCE--EEEEEECCCCCCEEEEEC
T ss_conf 98247656478998898-852698469997148--8518999999985797896535878--899854055775317883
Q ss_pred CCCCCCCCEEHHHHHCCCCCCCCCCCCCCCCHHHH---HHHHCCCEEEEECCCCCEEEEEECCC--------CCCCCCCC
Q ss_conf 34443320000000000112223465454424444---66544973444113331002675286--------51023320
Q gi|254780458|r 171 MDSVQSKSVVLLAGLNTPGITEVIEPVKTQDHMEI---ILKEFGVDLLIKSDTIEDYSVRIEGR--------KRISGCNL 239 (449)
Q Consensus 171 ~~S~q~~s~lLlA~~~~~g~t~i~~~~~s~~~i~~---~L~~fG~~i~~~~~~~~~~~i~i~g~--------~~l~~~~~ 239 (449)
T Consensus 236 PDRIEAG-Tf~~AAA~T~G~~~~~~-v-~p~hL~~~~~KL~e~G~~~~~~~~~-----~~v~~~~~L~V~~D~~~k~v~i 307 (443)
T TIGR01072 236 PDRIEAG-TFLVAAAITRGEVLVKN-V-DPDHLRAVLAKLREIGAEVEVDENS-----IRVDMRQDLKVKLDKRLKAVDI 307 (443)
T ss_pred CCHHHHH-HHHEEEEEECCEEEEEC-C-CHHHHHHHHHHHHHCCCEEEEECCE-----EEEEECCCEEEEECCCCCCEEE
T ss_conf 8656786-65300233658179945-7-8789999999998649679997788-----9998558627975588888042
Q ss_pred C------CCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCC-------CEEEEECCCCCEEE
Q ss_conf 0------2321122100000112255653222333232222222100000134323444-------22787034320256
Q gi|254780458|r 240 K------IPGDSSIAFFPLAAALLIPGSDIKLLNVLTNPLRVGIIDILREMGADITLSN-------SRIESGENIADIRV 306 (449)
Q Consensus 240 ~------Ip~D~ssAa~~la~a~l~~g~~i~i~n~~~~~~q~~~ldiL~~mG~~i~~~~-------~~~~~~~~~~~i~~ 306 (449)
T Consensus 308 ~T~pyPGFPTDlQaq--f~aLl~~a~G~SvI~EtvFEnRf--~Hv~EL~RMGA~I~~~d~CLS~KCRY-~GN~Gn~A~i~ 382 (443)
T TIGR01072 308 ETLPYPGFPTDLQAQ--FMALLSQAEGTSVITETVFENRF--MHVDELIRMGADIKLEDECLSAKCRY-IGNFGNTAVIQ 382 (443)
T ss_pred CCCCCCCCCCCHHHH--HHHHHHHCCCEEEEECCCCCCHH--HHHHHHHCCCCCEEEECCCCCCCCCE-ECCCCCEEEEE
T ss_conf 378889888735699--99998546851799537752245--66689830798089962632410300-04788578996
Q ss_pred EEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCC-CCCCCCCHHHHHHHH-HHHHHHHHHHCCCEEEE
Q ss_conf 4202333234644354301110111232222347-410027200124568-99999999746978999
Q gi|254780458|r 307 RFSKIKGITISDNRLRSIVDEYPILLVISAFAEG-ETIIKGLAEVMTSKQ-FSGIIECFNINNIQYER 372 (449)
Q Consensus 307 ~~~~l~g~~i~~~~~~~~~D~~p~Lavla~~a~G-~t~i~gi~~lkesdR-i~~~~~~L~~~G~~~~~ 372 (449)
T Consensus 383 G~~~L~Ga~V~atDLRAg----~aLvlAGL~A~GG~T~v~~~~Hl---DRGYe~l~~KL~~LGAkI~r 443 (443)
T TIGR01072 383 GVEQLSGAEVMATDLRAG----AALVLAGLVAEGGETIVHNVYHL---DRGYEDLEEKLRALGAKIER 443 (443)
T ss_pred CCCCCCCCEEEECHHHHH----HHHHHHHHHCCCCCEEEEEEEEE---CCCCHHHHHHHHHCCCEEEC
T ss_conf 885344550252134577----99999987007993188014871---37735799999736836609