HHsearch alignment for GI: 254780458 and conserved domain: cd01556
>cd01556 EPSP_synthase EPSP synthase domain. 3-phosphoshikimate 1-carboxyvinyltransferase (5-enolpyruvylshikimate-3-phosphate synthase) (EC 2.5.1.19) catalyses the reaction between shikimate-3-phosphate (S3P) and phosphoenolpyruvate (PEP) to form 5-enolpyruvylshkimate-3-phosphate (EPSP), an intermediate in the shikimate pathway leading to aromatic amino acid biosynthesis. The reaction is phosphoenolpyruvate + 3-phosphoshikimate = phosphate + 5-O-(1-carboxyvinyl)-3-phosphoshikimate. It is found in bacteria and plants but not animals. The enzyme is the target of the widely used herbicide glyphosate, which has been shown to occupy the active site. In bacteria and plants, it is a single domain protein, while in fungi, the domain is found as part of a multidomain protein with functions that are all part of the shikimate pathway.
Probab=99.70 E-value=3.6e-16 Score=122.31 Aligned_cols=314 Identities=16% Similarity=0.181 Sum_probs=174.4
Q ss_pred CCCEEEEECCCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCEEECCCCCCCCEEECCCCCC---CEEEEECCCCCCCCC
Q ss_conf 22001343145531033123333344654210101231274101013432220120222111---113430234443320
Q gi|254780458|r 102 GYGLMMGVVGVYDFQTFFKGRAEILQPTIESLLAPLYQMGVQVKLPEDKRLPLVLHGPRTPN---PIVYKSPMDSVQSKS 178 (449)
Q Consensus 102 ~~r~l~~~l~~~~~~~~i~G~~~l~~Rpi~~li~~L~~lGa~i~~~~~~~~Pi~I~g~~~~~---~~~~~~~~~S~q~~s 178 (449)
T Consensus 14 s~r~li-~aaL~~g~~~i~n~~--~~~Dv~~~~~~l~~lG~~i~~~~~~---~~i~~~~~~~~~~~~~l~~g~s--Gt~~ 85 (409)
T cd01556 14 SHRALL-LAALAEGESRIENLL--DSDDTLATLEALRALGAKIEEEGGT---VEIVGGGGLGLPPEAVLDCGNS--GTTM 85 (409)
T ss_pred HHHHHH-HHHHCCCCEEECCCC--CCHHHHHHHHHHHHCCCEEEEECCE---EEEECCCCCCCCCCHHHHHCCC--HHHH
T ss_conf 999999-999659989990489--0399999999999879989980899---9998888877787411100024--1217
Q ss_pred EEHHHHH-CCCCCCCCCC--CCCCCC---HHHHHHHHCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCHHH--HHH
Q ss_conf 0000000-0011222346--545442---4444665449734441133310026752865102332002321122--100
Q gi|254780458|r 179 VVLLAGL-NTPGITEVIE--PVKTQD---HMEIILKEFGVDLLIKSDTIEDYSVRIEGRKRISGCNLKIPGDSSI--AFF 250 (449)
Q Consensus 179 ~lLlA~~-~~~g~t~i~~--~~~s~~---~i~~~L~~fG~~i~~~~~~~~~~~i~i~g~~~l~~~~~~Ip~D~ss--Aa~ 250 (449)
T Consensus 86 R~l~~ll~~~~~~~~l~G~~~l~~RPi~~~i~-~L~~lGa~i~~~~~~~---~~~~~~~~~l~~~~i~l~~~~SSQ~~Sa 161 (409)
T cd01556 86 RLLTGLLALQGGDSVLTGDESLRKRPMGRLVD-ALRQLGAEIEGREGGG---YPPLIGGGGLKGGEVEIPGAVSSQFKSA 161 (409)
T ss_pred HHHHHHHCCCCCEEEEECCHHHCCCCCHHHHH-HHHHCCCEEEECCCCC---CEEEECCCCCCCCEEEECCCCCCHHHHH
T ss_conf 65766651588369983773425898468999-9998899999627975---3347248995052899776455118879
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCC-CCC-CCHHCCCCCCCCCCCCEEEEECCCCCEEEEE-ECCCCCCCCCCCCCCCHHH
Q ss_conf 000112255653222333232222-222-1000001343234442278703432025642-0233323464435430111
Q gi|254780458|r 251 PLAAALLIPGSDIKLLNVLTNPLR-VGI-IDILREMGADITLSNSRIESGENIADIRVRF-SKIKGITISDNRLRSIVDE 327 (449)
Q Consensus 251 ~la~a~l~~g~~i~i~n~~~~~~q-~~~-ldiL~~mG~~i~~~~~~~~~~~~~~~i~~~~-~~l~g~~i~~~~~~~~~D~ 327 (449)
T Consensus 162 lLmaa~~a~g-~t~i~~~~~es~~yvd~T~~~L~~~Ga~I~~~~~~--------~i~I~g~~~l~~~~~~V--~~D~s-~ 229 (409)
T cd01556 162 LLLAAPLAEG-PTTIIIGELESKPYIDHTERMLRAFGAEVEVDGYR--------TITVKGGQKYKGPEYTV--EGDAS-S 229 (409)
T ss_pred HHHHHHHCCC-CEEEECCCCCCCCHHHHHHHHHHHCCCEEEECCCE--------EEEECCCCCCCCCEECC--CCCHH-H
T ss_conf 9999873699-57997467466119999999998579828963981--------99977863346750137--88988-9
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEC-CEEEEECCCCCCCCCCCCCCEEECCCCHHHHH
Q ss_conf 01112322223474100272001245689999999974697899988-95999767887666656872660488458999
Q gi|254780458|r 328 YPILLVISAFAEGETIIKGLAEVMTSKQFSGIIECFNINNIQYEREG-DYLMIKGVPGGKGLGCSTGHMVQSKFGYRVAM 406 (449)
Q Consensus 328 ~p~Lavla~~a~G~t~i~gi~~lkesdRi~~~~~~L~~~G~~~~~~~-d~l~I~G~~~~~~~~~~~~~~v~s~~DHRiaM 406 (449)
T Consensus 230 A~~~l~aaalt~~~v~i~~v~~--~~~d-~~~~~~L~~mG~~i~~~~~~~i~~~~~~~l~~~~i~----~~~~pD--l~p 300 (409)
T cd01556 230 AAFFLAAAAITGSEIVIKNVGL--NSGD-TGIIDVLKEMGADIEIGNEDTVVVESGGKLKGIDID----GNDIPD--EAP 300 (409)
T ss_pred HHHHHHHHHHCCCEEEEECCCC--CCCH-HHHHHHHHHCCCEEEEECCCEEEECCCCCCCCEEEC----CCCCCH--HHH
T ss_conf 9999999997699499907783--2117-999999998799899946978997358885447825----876860--579
Q ss_pred HHHHHHHHCCCCEEEECCCEECC--C--CCCHHHHHHHCCCEEEEE
Q ss_conf 99999973599589944543027--7--869888998659789885
Q gi|254780458|r 407 SFLVMGLASEYSVVVDDYTMIST--I--FPDFINLMKTLGARIEWV 448 (449)
Q Consensus 407 a~~i~gl~~~~~~~I~~~~~v~k--s--yP~F~~~l~~LGa~ie~~ 448 (449)
T Consensus 301 ~lavla~~a~G~s~i~~~~~lr~KEsdRi~a~~~eL~k~Ga~i~~~ 346 (409)
T cd01556 301 TLAVLAAFAEGPTRIRNAAELRVKESDRIAAMATELRKLGADVEET 346 (409)
T ss_pred HHHHHHHHCCCCEEEEECCCCCCEECCHHHHHHHHHHHCCCEEEEE
T ss_conf 9999998568972787320112031307899999999779979997