HHSEARCH alignment of GI: 254780458 and SCOP domain: d1p88a_

Alignment
>d1p88a_ d.68.2.2 (A:) 5-enol-pyruvyl shikimate-3-phosphate (EPSP) synthase {Escherichia coli [TaxId: 562]}
Probab=100.00  E-value=3.2e-35  Score=241.18  Aligned_cols=207  Identities=18%  Similarity=0.232  Sum_probs=166.4

Q ss_pred             HHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCEEEEECCEEEEEE--CCCCCCCCCCCEEEECCCCCCCCEEEE
Q ss_conf             999999997449849997798028999999999984979999899899981--268875685310550333332200134
Q gi|254780458|r   31 SHFSIILGGIAAGETQIRGVLESDDVLNTMRMMHYLGARFTKKDREWIVQG--VGNGCLLSPEYPLDFKGFDMGYGLMMG  108 (449)
Q Consensus        31 s~RaLl~AaLa~g~s~i~n~~~s~Dv~~~l~al~~LG~~i~~~~~~~~i~g--~g~~~~~~~~~~i~~~~sgt~~r~l~~  108 (449)
                      |||||++|||++|+|+|+|++.++||..|+++|++||++|+++++...+..  .+......+....+.+.+++.+++++.
T Consensus         1 S~Rali~AaLa~g~t~I~n~~~~~Dv~~~i~~L~~lG~~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (216)
T d1p88a_           1 SNRALLLAALAHGKTVLTNLLDSDDVRHMLNALTALGVSYTLSADRTRCEIIGNGGPLHAEGALELFLGNAGTAMRPLAA   80 (216)
T ss_dssp             CTHHHHHHHSEESEEEEESCCCSHHHHHHHHHHHHHTCEEEECSSSCCEEEECCSSSCCCSSCEEEECSSCHHHHHHHHH
T ss_pred             CHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCEEEECCCCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCEEC
T ss_conf             97999999976998899689975899999999998499799837630357502333443223201012332201110110


Q ss_pred             ECCCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCEEECC-CCCCCCEEECCCCCCCEEEEECCCCCCCCCEEHHHHHCC
Q ss_conf             3145531033123333344654210101231274101013-432220120222111113430234443320000000000
Q gi|254780458|r  109 VVGVYDFQTFFKGRAEILQPTIESLLAPLYQMGVQVKLPE-DKRLPLVLHGPRTPNPIVYKSPMDSVQSKSVVLLAGLNT  187 (449)
Q Consensus       109 ~l~~~~~~~~i~G~~~l~~Rpi~~li~~L~~lGa~i~~~~-~~~~Pi~I~g~~~~~~~~~~~~~~S~q~~s~lLlA~~~~  187 (449)
                      .++.....+.+.|+++++.||+++++++|+++|++++..+ ++.+|+.+.|+..++.+.++...+| |+.+++|||++.+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~G~~i~~~~~~~~~p~~~~g~~~~~~i~i~~~~Ss-q~~s~lllaa~~~  159 (216)
T d1p88a_          81 ALCLGSNDIVLTGEPRMKERPIGHLVDALRLGGAKITYLEQENYPPLRLQGGFTGGNVDVDGSVSS-QFLTALLMTAPLA  159 (216)
T ss_dssp             HTTSSCCCEEEECCGGGGGSCCHHHHHHHHHTTCCEECSSSTTSSCCEECCCCCCCCEEEESSSCH-HHHHHHHHHSTTS
T ss_pred             CCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCEEEECCCCCEEEEEECCCCCCCEEEECCCCCH-HHHHHHHHHHHHC
T ss_conf             112456324430353323321013344454168589963675313577558876852998478871-8886899999755


Q ss_pred             CCCCCC--CCCCCCCCHHHHH---HHHCCCEEEEECCCCCEEEEEECCCCCCC-CCCCCCC
Q ss_conf             112223--4654544244446---65449734441133310026752865102-3320023
Q gi|254780458|r  188 PGITEV--IEPVKTQDHMEII---LKEFGVDLLIKSDTIEDYSVRIEGRKRIS-GCNLKIP  242 (449)
Q Consensus       188 ~g~t~i--~~~~~s~~~i~~~---L~~fG~~i~~~~~~~~~~~i~i~g~~~l~-~~~~~Ip  242 (449)
                      ++.+++  .++..|+||+++|   |++||++|+.++.    +.|+|+|+|+|. |.||.||
T Consensus       160 ~~~t~I~~~~~~~s~~~v~~t~~~L~~~Ga~I~~~~~----~~i~I~G~~~~~~p~dy~vE  216 (216)
T d1p88a_         160 PEDTVIRIKGDLVSKPYIDITLNLMKTFGVEIENQHY----QQFVVKGGQSYQSPGTYLVE  216 (216)
T ss_dssp             SSCEEEEEESSCSCHHHHHHHHHHHHTTTCCEEECSS----SCEEECSSCCEECCSEEECC
T ss_pred             CCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCC----CEEEECCCCCCCCCCEEEEC
T ss_conf             8964899535457876399999999988996996689----88999099744579328969


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: IF3-like
superfamily: EPT/RTPC-like
family: Enolpyruvate transferase, EPT
domain: 5-enol-pyruvyl shikimate-3-phosphate (EPSP) synthase
species: Escherichia coli [TaxId: 562]