HHSEARCH alignment of GI: 254780458 and SCOP domain: d1p88a_

Alignment
>d1p88a_ d.68.2.2 (A:) 5-enol-pyruvyl shikimate-3-phosphate (EPSP) synthase {Escherichia coli [TaxId: 562]}
Probab=99.16  E-value=4.8e-11  Score=86.63  Aligned_cols=193  Identities=20%  Similarity=0.232  Sum_probs=102.8

Q ss_pred             EEHHHHHCCCCCCCCCCCCCCCCHHHH--HHHHCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCC-HHHH--HHCCC
Q ss_conf             000000000112223465454424444--665449734441133310026752865102332002321-1221--00000
Q gi|254780458|r  179 VVLLAGLNTPGITEVIEPVKTQDHMEI--ILKEFGVDLLIKSDTIEDYSVRIEGRKRISGCNLKIPGD-SSIA--FFPLA  253 (449)
Q Consensus       179 ~lLlA~~~~~g~t~i~~~~~s~~~i~~--~L~~fG~~i~~~~~~~~~~~i~i~g~~~l~~~~~~Ip~D-~ssA--a~~la  253 (449)
                      +||+|+ +++|++++.+...+.|-..+  .|++||++|....+..   .+.+.+...........+.+ -+++  .++++
T Consensus         4 ali~Aa-La~g~t~I~n~~~~~Dv~~~i~~L~~lG~~I~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (216)
T d1p88a_           4 ALLLAA-LAHGKTVLTNLLDSDDVRHMLNALTALGVSYTLSADRT---RCEIIGNGGPLHAEGALELFLGNAGTAMRPLA   79 (216)
T ss_dssp             HHHHHH-SEESEEEEESCCCSHHHHHHHHHHHHHTCEEEECSSSC---CEEEECCSSSCCCSSCEEEECSSCHHHHHHHH
T ss_pred             HHHHHH-HCCCCEEEECCCCCHHHHHHHHHHHHCCCEEEECCCCC---EEEEECCCCCCCCCCCEEECCCCCCCCCCCEE
T ss_conf             999999-76998899689975899999999998499799837630---35750233344322320101233220111011


Q ss_pred             CCCCCCCCCCCCCCCCCCCCC--CCCCCHHCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCC--CCCCCCCCCCHHHCC
Q ss_conf             112255653222333232222--2221000001343234442278703432025642023332--346443543011101
Q gi|254780458|r  254 AALLIPGSDIKLLNVLTNPLR--VGIIDILREMGADITLSNSRIESGENIADIRVRFSKIKGI--TISDNRLRSIVDEYP  329 (449)
Q Consensus       254 ~a~l~~g~~i~i~n~~~~~~q--~~~ldiL~~mG~~i~~~~~~~~~~~~~~~i~~~~~~l~g~--~i~~~~~~~~~D~~p  329 (449)
                      +.+......+.+.+-.....+  ...++.|++||++++...+..     ...+.+. +++.+.  +++   .+..+...-
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~G~~i~~~~~~~-----~~p~~~~-g~~~~~~i~i~---~~~Ssq~~s  150 (216)
T d1p88a_          80 AALCLGSNDIVLTGEPRMKERPIGHLVDALRLGGAKITYLEQEN-----YPPLRLQ-GGFTGGNVDVD---GSVSSQFLT  150 (216)
T ss_dssp             HHTTSSCCCEEEECCGGGGGSCCHHHHHHHHHTTCCEECSSSTT-----SSCCEEC-CCCCCCCEEEE---SSSCHHHHH
T ss_pred             CCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCEEEECCCCC-----EEEEEEC-CCCCCCEEEEC---CCCCHHHHH
T ss_conf             01124563244303533233210133444541685899636753-----1357755-88768529984---788718886


Q ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEC-CEEEEECCCC
Q ss_conf             112322223474100272001245689999999974697899988-9599976788
Q gi|254780458|r  330 ILLVISAFAEGETIIKGLAEVMTSKQFSGIIECFNINNIQYEREG-DYLMIKGVPG  384 (449)
Q Consensus       330 ~Lavla~~a~G~t~i~gi~~lkesdRi~~~~~~L~~~G~~~~~~~-d~l~I~G~~~  384 (449)
                      .|..+|++++|.++|+....+.....++.+.+.|++||++++.++ +.+.|.|.+.
T Consensus       151 ~lllaa~~~~~~t~I~~~~~~~s~~~v~~t~~~L~~~Ga~I~~~~~~~i~I~G~~~  206 (216)
T d1p88a_         151 ALLMTAPLAPEDTVIRIKGDLVSKPYIDITLNLMKTFGVEIENQHYQQFVVKGGQS  206 (216)
T ss_dssp             HHHHHSTTSSSCEEEEEESSCSCHHHHHHHHHHHHTTTCCEEECSSSCEEECSSCC
T ss_pred             HHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCEEEECCCCC
T ss_conf             89999975589648995354578763999999999889969966898899909974


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: IF3-like
superfamily: EPT/RTPC-like
family: Enolpyruvate transferase, EPT
domain: 5-enol-pyruvyl shikimate-3-phosphate (EPSP) synthase
species: Escherichia coli [TaxId: 562]