HHSEARCH alignment of GI: 254780458 and SCOP domain: d1rf6a_

Alignment
>d1rf6a_ d.68.2.2 (A:) 5-enol-pyruvyl shikimate-3-phosphate (EPSP) synthase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=100.00  E-value=0  Score=693.70  Aligned_cols=416  Identities=31%  Similarity=0.492  Sum_probs=381.1

Q ss_pred             ECCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCEEEEECCEEEEEECCCCCCCCCCC
Q ss_conf             06885369998184222899999999744984999779802899999999998497999989989998126887568531
Q gi|254780458|r   13 SYSCGLQGTICIPGDRSLSHFSIILGGIAAGETQIRGVLESDDVLNTMRMMHYLGARFTKKDREWIVQGVGNGCLLSPEY   92 (449)
Q Consensus        13 ~~~~~L~G~i~vp~SKs~s~RaLl~AaLa~g~s~i~n~~~s~Dv~~~l~al~~LG~~i~~~~~~~~i~g~g~~~~~~~~~   92 (449)
                      .++++|+|+|++|||||+|||+|++|+|++|+|+|+|+++|+||..|+++|++||++|++++++++|+|.|.+.+..|+.
T Consensus         5 ~~~~~l~G~i~~pgSKS~s~R~L~laaLa~g~s~i~n~~~s~Dv~~~~~~L~~lG~~i~~~~~~~~I~g~g~~~~~~~~~   84 (427)
T d1rf6a_           5 TNIRHLHGIIRVPGDKSISHRSIIFGSLAEGETKVYDILRGEDVLSTMQVFRDLGVEIEDKDGVITVQGVGMAGLKAPQN   84 (427)
T ss_dssp             CCCCCEEEEECCCBCHHHHHHHHHHHHHSBSEEEEESCCCSHHHHHHHHHHHHTTCEEEEETTEEEEECCCSSCCCCCSS
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCEEEECCCEEEEEECCCCCCCCCHH
T ss_conf             68877179998378689999999999976998999379904999999999997889899759999999168877678615


Q ss_pred             EEEECCCCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCEEECC-CCCCCCEEECCCCCCCEEEEECC
Q ss_conf             05503333322001343145531033123333344654210101231274101013-43222012022211111343023
Q gi|254780458|r   93 PLDFKGFDMGYGLMMGVVGVYDFQTFFKGRAEILQPTIESLLAPLYQMGVQVKLPE-DKRLPLVLHGPRTPNPIVYKSPM  171 (449)
Q Consensus        93 ~i~~~~sgt~~r~l~~~l~~~~~~~~i~G~~~l~~Rpi~~li~~L~~lGa~i~~~~-~~~~Pi~I~g~~~~~~~~~~~~~  171 (449)
                      .+++++||+++||++++++..++.+.++|+++|++|||++|+++|++|||++++.+ ++.+|+.++|+...+++.+..+.
T Consensus        85 ~i~~~~sgt~~r~l~~l~a~~~~~v~~~G~~~l~~RPi~~l~~~L~~lGa~i~~~~~~~~~p~~i~g~~~~~~~~i~~~~  164 (427)
T d1rf6a_          85 ALNMGNSGTSIRLISGVLAGADFEVEMFGDDSLSKRPMDRVTLPLKKMGVSISGQTERDLPPLRLKGTKNLRPIHYELPI  164 (427)
T ss_dssp             CEECTTCHHHHHHHHHHGGGCSSEEEEECCTTGGGSCCHHHHHHHHHTTCEEEEETTTTEEEEEEECCTTCCCCEEECSS
T ss_pred             HHHHCCCCEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHCCCEEEECCCCCCEEEECCCCCCCCCEEEECCC
T ss_conf             56531443000012222245431120479813036555420006876394798303556202302477887445995357


Q ss_pred             CCCCCCCEEHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHC
Q ss_conf             44433200000000001122234654544244446654497344411333100267528651023320023211221000
Q gi|254780458|r  172 DSVQSKSVVLLAGLNTPGITEVIEPVKTQDHMEIILKEFGVDLLIKSDTIEDYSVRIEGRKRISGCNLKIPGDSSIAFFP  251 (449)
Q Consensus       172 ~S~q~~s~lLlA~~~~~g~t~i~~~~~s~~~i~~~L~~fG~~i~~~~~~~~~~~i~i~g~~~l~~~~~~Ip~D~ssAa~~  251 (449)
                      +|||+++++|||++..+|.+++.+.....++++.+|++||+++.+..     ..+.|+|+++|.|.+|.||+|||+|+||
T Consensus       165 ~S~q~ts~lllaa~~~~g~~~i~~~~~~~~~t~~~L~~~G~~i~~~~-----~~i~i~~~~~l~~~~~~V~~D~s~A~~~  239 (427)
T d1rf6a_         165 ASAQVKSALMFAALQAKGESVIIEKEYTRNHTEDMLQQFGGHLSVDG-----KKITVQGPQKLTGQKVVVPGDISSAAFW  239 (427)
T ss_dssp             CCHHHHHHHHHHHTTSSEEEEEECSSCCCCHHHHHHHHTTCCCEEET-----TEEEEEECCCCBCCEEECCBCHHHHHHH
T ss_pred             CCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCC-----EEEEECCCCEECCCEEECCCCHHHHHHH
T ss_conf             76756443554222058943553243107789999997399752231-----2899886311167469858976789999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCHHHCCCC
Q ss_conf             00112255653222333232222222100000134323444227870343202564202333234644354301110111
Q gi|254780458|r  252 LAAALLIPGSDIKLLNVLTNPLRVGIIDILREMGADITLSNSRIESGENIADIRVRFSKIKGITISDNRLRSIVDEYPIL  331 (449)
Q Consensus       252 la~a~l~~g~~i~i~n~~~~~~q~~~ldiL~~mG~~i~~~~~~~~~~~~~~~i~~~~~~l~g~~i~~~~~~~~~D~~p~L  331 (449)
                      +++|++++|++|+++|++.++.|.+++++|++||+++++.+.+..  .......+....|++++++..++|++||++|++
T Consensus       240 l~aaal~~g~~i~i~~~~~~~~~~~~~~~l~~~g~~i~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~p~~~d~~p~l  317 (427)
T d1rf6a_         240 LVAGLIAPNSRLVLQNVGINETRTGIIDVIRAMGGKLEITEIDPV--AKSATLIVESSDLKGTEICGALIPRLIDELPII  317 (427)
T ss_dssp             HHHHHHSTTEEEEEEEEECCTTTCHHHHHHHHTTCEEEEEEEETT--TTEEEEEEECCCCBCCEECTTSGGGTGGGHHHH
T ss_pred             HHHHHHCCCCEEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCC--CCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf             999996799879987789760016788764114530341133232--223402331266442223445588723455577


Q ss_pred             CCCCCCCCCCCCCCCCHHH--HHHHHHHHHHHHHHHCCCEEEEECCEEEEECCCCCCCCCCCCCCEEECCCCHHHHHHHH
Q ss_conf             2322223474100272001--24568999999997469789998895999767887666656872660488458999999
Q gi|254780458|r  332 LVISAFAEGETIIKGLAEV--MTSKQFSGIIECFNINNIQYEREGDYLMIKGVPGGKGLGCSTGHMVQSKFGYRVAMSFL  409 (449)
Q Consensus       332 avla~~a~G~t~i~gi~~l--kesdRi~~~~~~L~~~G~~~~~~~d~l~I~G~~~~~~~~~~~~~~v~s~~DHRiaMa~~  409 (449)
                      +++|++|+|+|+|+|++|+  |||||+.++.++|+|||+++++++|+++|+|++.      .+++.|+||+|||+|||++
T Consensus       318 a~la~~a~G~s~i~g~~~lr~kEsdRi~~~~~eL~klG~~~~~~~d~l~I~G~~~------l~g~~v~s~~DHRiama~~  391 (427)
T d1rf6a_         318 ALLATQAQGVTVIKDAEELKVKETDRIQVVADALNSMGADITPTADGMIIKGKSA------LHGARVNTFGDHRIGMMTA  391 (427)
T ss_dssp             HHHHHTSBEEEEECSCGGGGGSSSCTTHHHHHHHHTTTCCEEEETTEEEEEECCC------CCCEEEECTTCHHHHHHHH
T ss_pred             HHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEEECCCC------CCCCEEECCCCHHHHHHHH
T ss_conf             7765315784000207888889989999999999977997999899999979998------8478778988199999999


Q ss_pred             HHHHH-CCCCEEEECCCEECCCCCCHHHHHHHC
Q ss_conf             99973-599589944543027786988899865
Q gi|254780458|r  410 VMGLA-SEYSVVVDDYTMISTIFPDFINLMKTL  441 (449)
Q Consensus       410 i~gl~-~~~~~~I~~~~~v~ksyP~F~~~l~~L  441 (449)
                      ++|+. ++++++|+|++||+||||+||++|++|
T Consensus       392 i~al~~~~g~~~I~~~~~v~ksyP~F~~~l~~L  424 (427)
T d1rf6a_         392 IAALLVADGEVELDRAEAINTSYPSFFDDLESL  424 (427)
T ss_dssp             HHHHTCSSSCEEEETGGGGGGTCTTHHHHHHHH
T ss_pred             HHHHHCCCCCEEECCCCEEECCCHHHHHHHHHH
T ss_conf             999965899699827837978765099999997


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: IF3-like
superfamily: EPT/RTPC-like
family: Enolpyruvate transferase, EPT
domain: 5-enol-pyruvyl shikimate-3-phosphate (EPSP) synthase
species: Streptococcus pneumoniae [TaxId: 1313]