RPSBLAST alignment of GI: 254780458 and protein with PDBid: 3nvs
>3nvs_A 3-phosphoshikimate 1-carboxyvinyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: S3P SKM GPJ EPE; 1.02A {Vibrio cholerae} PDB: 1g6s_A* 1g6t_A* 1x8r_A* 1x8t_A* 2aa9_A* 2aay_A* 2pq9_A* 1eps_A 1mi4_A* 3fjz_A* 3fjx_A* 2qfs_A* 2qft_A* 2qfq_A* 2qfu_A* 3fk0_A* 3fk1_A* 1q36_A* 1p88_A 1p89_A Length = 450
Score = 219 bits (560), Expect = 8e-58
Identities = 81/432 (18%), Positives = 168/432 (38%), Gaps = 27/432 (6%)
Query: 18 LQGTICIPGDRSLSHFSIILGGIAAGETQIRGVLESDDVLNTMRMMHYLGA--RFTKKDR 75
+ G + +PG +S+S+ +++L +A+G T++ +L+SDD+ + + + LG R +
Sbjct: 36 ISGEVNLPGSKSVSNRALLLAALASGTTRLTNLLDSDDIRHMLNALTKLGVNYRLSADKT 95
Query: 76 EWIVQGVGNGCLLSPEYPLDFKGFDMGYGLMMGVVGVYDFQTFFKGRAEILQPTIESLLA 135
V+G+G + L + + + G + + I L+
Sbjct: 96 TCEVEGLGQAFHTTQPLELFLGNAGTAMRPLAAALCLGQGDYVLTGEPRMKERPIGHLVD 155
Query: 136 PLYQMGVQVK-LPEDKRLPLVLHGPRTPNPIVYKSPMDSVQSKSVVLLAGLNTPGITEV- 193
L Q G Q++ L ++ PL + G V S Q + L++ G +
Sbjct: 156 ALRQAGAQIEYLEQENFPPLRIQGTGLQAGTVTIDGSISSQFLTAFLMSAPLAQGKVTIK 215
Query: 194 -IEPVKTQDHMEIILKEFGVDLLIKSDTIEDYSVRIEGRKRISGCNLKIPGDSSIAFFPL 252
+ + ++ +++I L + + V G+ +S + GD+S A + L
Sbjct: 216 IVGELVSKPYIDITLHIMEQFGVQVINHDYQEFVIPAGQSYVSPGQFLVEGDASSASYFL 275
Query: 253 AAALLIPGSD-IKLLNVLTNPLRVGIIDILREMGADITLSNSRIESGENIADIRVRFSKI 311
AAA + G + + + + D L +MGA I + + R ++
Sbjct: 276 AAAAIKGGEVKVTGIGKNSIQGDIQFADALEKMGAQIEWGDDY---------VIARRGEL 326
Query: 312 KGITISDNRLRSIVDEYPILLVISAFAEGETIIKGLAE--VMTSKQFSGIIECFNINNIQ 369
+ + N I D + + FA+G T I+ + V + + + +
Sbjct: 327 NAVDLDFNH---IPDAAMTIATTALFAKGTTAIRNVYNWRVKETDRLAAMATELRKVGAT 383
Query: 370 YEREGDYLMIKGVPGGKGLGCSTGHMVQSKFGYRVAMSFLVMGLASEYSVVVDDYTMIST 429
E D+++I + + +R+AM F ++ L+ V ++D S
Sbjct: 384 VEEGEDFIVITPPTKLI------HAAIDTYDDHRMAMCFSLVALSDT-PVTINDPKCTSK 436
Query: 430 IFPDFINLMKTL 441
FPD+ + L
Sbjct: 437 TFPDYFDKFAQL 448