HHsearch alignment for GI: 254780459 and conserved domain: COG1066

>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones].

Probab=92.18  E-value=0.079  Score=32.09  Aligned_cols=29  Identities=28%  Similarity=0.247  Sum_probs=24.6

Q ss_pred             CCCHHHCCCCCCCCCCCEEEECCCCCCCCCCCCC
Q ss_conf             9752227831178888744214888722778987
Q gi|254780459|r    1 MAKPELGTKRTCPDTGKRFYDLNKQVIVSPYTQN   34 (129)
Q Consensus         1 MaK~elG~KR~C~~Cg~KFYDlnk~PiiCP~CG~   34 (129)
T Consensus         1 MaK~~--t~f~C~~CG~---~s~KW~GkCp~Cg~   29 (456)
T COG1066           1 MAKKK--TAFVCQECGY---VSPKWLGKCPACGA   29 (456)
T ss_pred             CCCCC--CEEECCCCCC---CCCCCCCCCCCCCC
T ss_conf             99766--2788445788---78621555988787