HHsearch alignment for GI: 254780459 and conserved domain: COG1996

>COG1996 RPC10 DNA-directed RNA polymerase, subunit RPC10 (contains C4-type Zn-finger) [Transcription].
Probab=92.79  E-value=0.05  Score=33.34  Aligned_cols=27  Identities=19%  Similarity=0.279  Sum_probs=22.0

Q ss_pred             CCCCCCCCEEEEC-CCCCCCCCCCCCEE
Q ss_conf             1178888744214-88872277898715
Q gi|254780459|r   10 RTCPDTGKRFYDL-NKQVIVSPYTQNSW   36 (129)
Q Consensus        10 R~C~~Cg~KFYDl-nk~PiiCP~CG~e~   36 (129)
T Consensus         7 Y~C~~Cg~~~~~~~~~~~irCp~Cg~rI   34 (49)
T COG1996           7 YKCARCGREVELDQETRGIRCPYCGSRI   34 (49)
T ss_pred             EEHHHCCCEEEHHHCCCCEECCCCCCEE
T ss_conf             9934558850001035744579888579