HHsearch alignment for GI: 254780459 and conserved domain: pfam09723
>pfam09723 CxxC_CxxC_SSSS Zinc ribbon domain. This entry represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria. The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.
Probab=91.20 E-value=0.15 Score=30.38 Aligned_cols=25 Identities=28% Similarity=0.507 Sum_probs=20.3
Q ss_pred CCCCCCCEEEECCC----CCCCCCCCCCE
Q ss_conf 17888874421488----87227789871
Q gi|254780459|r 11 TCPDTGKRFYDLNK----QVIVSPYTQNS 35 (129)
Q Consensus 11 ~C~~Cg~KFYDlnk----~PiiCP~CG~e 35 (129)
T Consensus 7 ~C~~Cg~~fe~~~~~~~~~~~~CP~C~~~ 35 (42)
T pfam09723 7 RCEDCGHTFEVLQKISDAPLATCPECGST 35 (42)
T ss_pred EECCCCCEEEEEEECCCCCCCCCCCCCCC
T ss_conf 94889998999986579988769799998