HHsearch results for GI: 254780459 and protein with PDBid: 1dl6_A

>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A

Probab=93.25  E-value=0.043  Score=32.36  Aligned_cols=39  Identities=13%  Similarity=0.126  Sum_probs=30.3

Q ss_pred             CCHHHCCCCCCCCCCCE--EEECCCCCCCCCCCCCEECHHH
Q ss_conf             75222783117888874--4214888722778987153233
Q gi|254780459|r    2 AKPELGTKRTCPDTGKR--FYDLNKQVIVSPYTQNSWPLAY   40 (129)
Q Consensus         2 aK~elG~KR~C~~Cg~K--FYDlnk~PiiCP~CG~e~~~~~   40 (129)
                      ++...-.|..||+||.+  .||-.+--+||..||..+.-..
T Consensus         4 ~~~~~~~~~~Cp~Cgs~~iv~D~~~Ge~vC~~CG~Vlee~~   44 (58)
T 1dl6_A            4 SRLDALPRVTCPNHPDAILVEDYRAGDMICPECGLVVGDRV   44 (58)
T ss_dssp             CSCCCCSCCSBTTBSSSCCEECSSSCCEECTTTCCEECCSC
T ss_pred             CCCCCCCCCCCCCCCCCCEEEECCCCEEECCCCCCEECCCC
T ss_conf             42325675589698798777888899187278998924331