HHsearch results for GI: 254780459 and protein with PDBid: 2apo_B
>2apo_B Ribosome biogenesis protein NOP10; protein-protein complex, box H/ACA, snoRNP, pseudouridine synthase, RNA modification; 1.95A {Methanocaldococcus jannaschii} SCOP: g.41.16.1 PDB: 2aqc_A
Probab=93.18 E-value=0.036 Score=32.86 Aligned_cols=22 Identities=27% Similarity=0.712 Sum_probs=18.7
Q ss_pred CCCCCCCCCEEEECCCCCCCCCCCCCE
Q ss_conf 311788887442148887227789871
Q gi|254780459|r 9 KRTCPDTGKRFYDLNKQVIVSPYTQNS 35 (129)
Q Consensus 9 KR~C~~Cg~KFYDlnk~PiiCP~CG~e 35 (129)
=|.|++||. |=|.. +||.||..
T Consensus 6 irkC~~C~~--YTL~~---~Cp~CG~~ 27 (60)
T 2apo_B 6 MKKCPKCGL--YTLKE---ICPKCGEK 27 (60)
T ss_dssp CEECTTTCC--EESSS---BCSSSCSB
T ss_pred HHHCCCCCC--EECCC---CCCCCCCC
T ss_conf 651874666--53545---37678784