HHSEARCH alignment of GI: 254780459 and SCOP domain: d1pfta_

Alignment

Probab=91.67  E-value=0.038  Score=31.23  Aligned_cols=31  Identities=19%  Similarity=0.323  Sum_probs=25.7

Q ss_pred             CCCCCCCCCCE--EEECCCCCCCCCCCCCEECH
Q ss_conf             83117888874--42148887227789871532
Q gi|254780459|r    8 TKRTCPDTGKR--FYDLNKQVIVSPYTQNSWPL   38 (129)
Q Consensus         8 ~KR~C~~Cg~K--FYDlnk~PiiCP~CG~e~~~   38 (129)
                      .+|+||.||.+  .+|..+--++|-.||..+.-
T Consensus         4 ~~~~Cp~Cgs~~iv~D~~~Ge~vC~~CG~Viee   36 (50)
T d1pfta_           4 KQKVCPACESAELIYDPERGEIVCAKCGYVIEE   36 (50)
T ss_dssp             SCCSCTTTSCCCEEEETTTTEEEESSSCCBCCC
T ss_pred             CCCCCCCCCCCCEEEECCCCEEECCCCCCEECC
T ss_conf             553484887983788878790850049869252

SCOP domain information

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIB, N-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]