HHSEARCH alignment of GI: 254780459 and SCOP domain: d1vd4a_

Alignment

Probab=91.53  E-value=0.058  Score=30.14  Aligned_cols=28  Identities=14%  Similarity=0.326  Sum_probs=23.0

Q ss_pred             CCCCCCCEE--------EECCCCCCCCCCCCCEECH
Q ss_conf             178888744--------2148887227789871532
Q gi|254780459|r   11 TCPDTGKRF--------YDLNKQVIVSPYTQNSWPL   38 (129)
Q Consensus        11 ~C~~Cg~KF--------YDlnk~PiiCP~CG~e~~~   38 (129)
                      +||.|+++|        +|+...-.+|-+|++++..
T Consensus        16 ~Cp~C~~~ys~Lda~~L~d~~~~~F~C~~C~~el~e   51 (62)
T d1vd4a_          16 KCPVCSSTFTDLEANQLFDPMTGTFRCTFCHTEVEE   51 (62)
T ss_dssp             ECSSSCCEEEHHHHHHHEETTTTEEBCSSSCCBCEE
T ss_pred             ECCCCCCCCCHHHHHHHCCCCCCEEEECCCCCEEEC
T ss_conf             889988880554387736967893973588999753

SCOP domain information

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]