RPS-BLAST 2.2.22 [Sep-27-2009]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= gi|254780459|ref|YP_003064872.1| hypothetical protein
CLIBASIA_01720 [Candidatus Liberibacter asiaticus str. psy62]
         (129 letters)



>d1rp4a_ a.227.1.1 (A:) Endoplasmic oxidoreductin 1, Ero1p {Baker's
           yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
          Length = 374

 Score = 28.0 bits (62), Expect = 0.25
 Identities = 11/75 (14%), Positives = 33/75 (44%), Gaps = 9/75 (12%)

Query: 53  ICSLEEETEVKPFVKHTSEEEEESPISKEEDDTSLDMEYV--------QEMDLDDDDDFL 104
           +  +E+   +  + +        +   KE DD+  + +++        + +D++D  ++ 
Sbjct: 54  VDVVEDWDTLPEYWQPEILGSFNNDTMKEADDSDDECKFLDQLCQTSKKPVDIEDTINYC 113

Query: 105 EQNDTDTDTDV-VDM 118
           + ND +    V +D+
Sbjct: 114 DVNDFNGKNAVLIDL 128


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.305    0.128    0.361 

Gapped
Lambda     K      H
   0.267   0.0557    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 486,246
Number of extensions: 21083
Number of successful extensions: 36
Number of sequences better than 10.0: 1
Number of HSP's gapped: 36
Number of HSP's successfully gapped: 8
Length of query: 129
Length of database: 2,407,596
Length adjustment: 76
Effective length of query: 53
Effective length of database: 1,364,116
Effective search space: 72298148
Effective search space used: 72298148
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 48 (22.7 bits)