HHsearch alignment for GI: 254780460 and conserved domain: cd01287

>cd01287 FabA FabA, beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase: Bacterial protein of the type II, fatty acid synthase system that binds ACP and catalyzes both dehydration and isomerization reactions, apparently in the same active site. The FabA structure is a homodimer with two independent active sites located at the dimer interface. Each active site is tunnel-shaped and completely inaccessible to solvent. No metal ions or cofactors are required for ligand binding or catalysis.
Probab=100.00  E-value=0  Score=315.34  Aligned_cols=142  Identities=43%  Similarity=0.747  Sum_probs=131.5

Q ss_pred             CCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCC------
Q ss_conf             88998641225689999718441342357887507865530045568995211275788879988640123346------
Q gi|254780460|r   27 AQLPKPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGE------  100 (172)
Q Consensus        27 ~rLP~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~------  100 (172)
T Consensus         1 ~rLp~~~~lm~Drv~~i~~~GG~~~~G~i~ae~~i~~~~wff~~HF~~dpvmPG~L~~ea~~Q~l~~yl~~~G~~~~~~~   80 (150)
T cd01287           1 PRLPGGQLLMLDRVTEIDPGGGTFGLGYLRAEKDIDPDDWFFPCHFHGDPVMPGSLGLEAMIQLLQFYLIWLGLGTGVDN   80 (150)
T ss_pred             CCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf             97789977656999999179985454099999915878571147899899145536999999999999986776544568


Q ss_pred             -CCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEEC-CCCEEEEEEEEEEECCEEEEEEEEEEEEEECC
Q ss_conf             -882667630451141023379857999999889630-78579999999999999999997106998617
Q gi|254780460|r  101 -LGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILR-GRVVLGAADGWVKVNGKEIYQANDLRVCLTID  168 (172)
Q Consensus       101 -~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~-~~~~~~~~~g~~~vdg~~i~~a~~l~vgl~~d  168 (172)
T Consensus        81 ~~f~~~~~~~~~~kfRGQV~P~~k~v~yev~I~~v~~~~~~~~~iADg~l~vDGk~Iy~~~~l~v~l~~~  150 (150)
T cd01287          81 PRFQGAPGGPGEWKYRGQITPHNKKVTYEVHIKEVGRDGPRPYIIADASLWVDGLRIYEAKDIAVRLVEA  150 (150)
T ss_pred             CCCEEECCCEEEEEEEEEECCCCCEEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEECCCEEEEEEC
T ss_conf             7742033850279997886679938999999999980499589999999998998999980889998729