HHsearch alignment for GI: 254780460 and conserved domain: cd01287
>cd01287 FabA FabA, beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase: Bacterial protein of the type II, fatty acid synthase system that binds ACP and catalyzes both dehydration and isomerization reactions, apparently in the same active site. The FabA structure is a homodimer with two independent active sites located at the dimer interface. Each active site is tunnel-shaped and completely inaccessible to solvent. No metal ions or cofactors are required for ligand binding or catalysis.
Probab=100.00 E-value=0 Score=315.34 Aligned_cols=142 Identities=43% Similarity=0.747 Sum_probs=131.5
Q ss_pred CCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCC------
Q ss_conf 88998641225689999718441342357887507865530045568995211275788879988640123346------
Q gi|254780460|r 27 AQLPKPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGE------ 100 (172)
Q Consensus 27 ~rLP~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~------ 100 (172)
T Consensus 1 ~rLp~~~~lm~Drv~~i~~~GG~~~~G~i~ae~~i~~~~wff~~HF~~dpvmPG~L~~ea~~Q~l~~yl~~~G~~~~~~~ 80 (150)
T cd01287 1 PRLPGGQLLMLDRVTEIDPGGGTFGLGYLRAEKDIDPDDWFFPCHFHGDPVMPGSLGLEAMIQLLQFYLIWLGLGTGVDN 80 (150)
T ss_pred CCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 97789977656999999179985454099999915878571147899899145536999999999999986776544568
Q ss_pred -CCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEEC-CCCEEEEEEEEEEECCEEEEEEEEEEEEEECC
Q ss_conf -882667630451141023379857999999889630-78579999999999999999997106998617
Q gi|254780460|r 101 -LGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILR-GRVVLGAADGWVKVNGKEIYQANDLRVCLTID 168 (172)
Q Consensus 101 -~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~-~~~~~~~~~g~~~vdg~~i~~a~~l~vgl~~d 168 (172)
T Consensus 81 ~~f~~~~~~~~~~kfRGQV~P~~k~v~yev~I~~v~~~~~~~~~iADg~l~vDGk~Iy~~~~l~v~l~~~ 150 (150)
T cd01287 81 PRFQGAPGGPGEWKYRGQITPHNKKVTYEVHIKEVGRDGPRPYIIADASLWVDGLRIYEAKDIAVRLVEA 150 (150)
T ss_pred CCCEEECCCEEEEEEEEEECCCCCEEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEECCCEEEEEEC
T ss_conf 7742033850279997886679938999999999980499589999999998998999980889998729