HHsearch alignment of GI: 254780460 and MMDB domain: 1yoc_A_
>1yoc_A (A:) Hypothetical protein PA1835; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.70A {Pseudomonas aeruginosa PAO1}
Probab=97.23 E-value=0.014 Score=35.22 Aligned_cols=116 Identities=10% Similarity=-0.001 Sum_probs=72.2
Q ss_pred CCCCE--EEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
Q ss_conf 86412--2568999971844134235788750786553004556899521127578887998864012334688266763
Q gi|254780460|r 31 KPPML--MFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVS 108 (172)
Q Consensus 31 ~~p~l--miDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~ 108 (172)
..||. +=-+++++++ |+++.+..++++ .. -...++-|-.+.-.+--+++..+ ............
T Consensus 25 ~~p~~~~~g~~~~~~~~-------~~~~~~~~~~~~--~~----n~~g~vhGG~~~~l~D~~~g~~~-~~~~~~~~~~~t 90 (147)
T 1yoc_A 25 FAPYFASIAPQFVELRP-------GYAEVTFPKRRE--VL----NHIGTVHAIALCNAAELAAGTMT-DASIPAGHRWIP 90 (147)
T ss_dssp HSGGGGGGCCEEEEEET-------TEEEEEECCCGG--GB----CTTSSBCHHHHHHHHHHHHHHHH-HHHSCTTEEEEE
T ss_pred HCCHHHCCCCEEEEEEC-------CEEEEEEEECHH--HH----CCHHHHHHHHHHHHHHHHHHHHH-HHHCCCCCEEEE
T ss_conf 18912213749999939-------999999995579--93----85124338898999999999999-975898760688
Q ss_pred E-CCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEEEE
Q ss_conf 0-451141023379857999999889630785799999999999999999971069
Q gi|254780460|r 109 V-SNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQANDLRV 163 (172)
Q Consensus 109 ~-~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~v 163 (172)
+ -+++|++++..|+. .++++.++.++++..++.+++++.+|+++++++...+
T Consensus 91 ~~l~i~f~~p~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~va~~~~t~~ 143 (147)
T 1yoc_A 91 RGMTVEYLAKATGDVR---AVADGSQIDWQATGNLVVPVVAYVDDKPVFRAEITMY 143 (147)
T ss_dssp EEEEEEECSCCCSCEE---EEEECTTSCTTCCEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEEEEEEEECCCCEE---EEEEEEEHHCCCCCEEEEEEEEECCCCEEEEEEEEEE
T ss_conf 8888998740469779---9999974006564059999999849958999999999