HHsearch alignment of GI: 254780460 and MMDB domain: 2f41_A_
>2f41_A (A:) Transcription factor FAPR; 'HOT-DOG' fold, gene regulation; 2.50A {Bacillus subtilis}
Probab=98.12 E-value=9e-05 Score=48.26 Aligned_cols=108 Identities=9% Similarity=0.039 Sum_probs=71.2
Q ss_pred EEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEE
Q ss_conf 25689999718441342357887507865530045568995211275788879988640123346882667630451141
Q gi|254780460|r 36 MFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFR 115 (172)
Q Consensus 36 miDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr 115 (172)
+++++.++.++.. .+....+.+++..| ..++++|.++...+.+.++.++.. ........+++|+
T Consensus 7 l~~~~~~~~~d~~------~i~~~~~~~~~~~~-----~~~i~hGg~~~~~~d~~~~~~~~~-----~~~~~~~~~i~f~ 70 (121)
T 2f41_A 7 VIGEIIDLELDDQ------AISILEIKQEHVFS-----RNQIARGHHLFAQANSLAVAVIDD-----ELALTASADIRFT 70 (121)
T ss_dssp CSSEEEEEETTTE------EEEEEECCGGGBCS-----TTCBBCHHHHHHHHHHHHHHTC--------CCCEEEEEEEEC
T ss_pred HCCEEEEEECCCC------EEEEEEECCCEECC-----CCCCCCCCHHHHHHHHHHHHHCCC-----CCEEEEEEEEEEE
T ss_conf 3371799948950------89999731200038-----888746243999999999987399-----6236034331757
Q ss_pred EEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEE
Q ss_conf 0233798579999998896307857999999999999999999710
Q gi|254780460|r 116 GMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQANDL 161 (172)
Q Consensus 116 ~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l 161 (172)
++|.|||. ++.+.++.+...+.. .+.+......+|+++++++--
T Consensus 71 ~pv~~Gd~-i~~~a~v~~~~~~~~-~~~~~i~~~~~~~~v~~~~~~ 114 (121)
T 2f41_A 71 RQVKQGER-VVAKAKVTAVEKEKG-RTVVEVNSYVGEEIVFSGRFD 114 (121)
T ss_dssp SCCBTTCE-EEEEEEEEEECSSSS-CEEEEEEEEETTEEEEEEEEE
T ss_pred ECCCCCCE-EEEEEEEEEEECEEE-EEEEEEEEEECCEEEEEEEEE
T ss_conf 52352638-999999999823057-999999997899999999999