HHsearch results for GI: 254780460 and protein with PDBid: 3lw3_A

>3lw3_A HP0420 homologue; hotdog-fold, structural genomics, unknown function; 1.60A {Helicobacter felis} PDB: 3lwg_A
Probab=93.30  E-value=0.41  Score=25.63  Aligned_cols=108  Identities=5%  Similarity=-0.004  Sum_probs=62.6

Q ss_pred             EEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEE
Q ss_conf             25689999718441342357887507865530045568995211275788879988640123346882667630451141
Q gi|254780460|r   36 MFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFR  115 (172)
Q Consensus        36 miDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr  115 (172)
                      +-=+++++++       |+++.+..++++  +.+.    .-++-|-++.- ++-.+..+...    .......-.+++|.
T Consensus        26 Lg~ei~~~~~-------G~~~~~l~v~~~--~~n~----~G~vHGG~i~t-l~D~a~~~a~~----~~~~vT~~~~i~fl   87 (145)
T 3lw3_A           26 LCAELISFGS-------GKATVCLTPKEF--MLCE----DDVVHAGFIVG-AASFAALCALN----KKNSLISSMKVNLL   87 (145)
T ss_dssp             GSCEEEEEET-------TEEEEEECCCGG--GEEE----TTEECHHHHHH-HHHHHHHHHHC----CTTEEEEEEEEEEC
T ss_pred             HCEEEEEEEC-------CEEEEEECCCHH--HHCC----CCCCCHHHEEH-HHHHHHHHHHC----CCCEEEEEEEEEEE
T ss_conf             2919999969-------989999739989--9297----89184102515-56542166537----78569711325882


Q ss_pred             EEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEEEEEE
Q ss_conf             02337985799999988963078579999999999999999997106998
Q gi|254780460|r  116 GMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQANDLRVCL  165 (172)
Q Consensus       116 ~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~vgl  165 (172)
                      +++.+|+. ++.+.++.+   .++...+.+++++++++.+++++--++-+
T Consensus        88 ~p~~~G~~-l~a~A~vv~---~g~r~~~v~vev~~~d~~V~~gt~~~~v~  133 (145)
T 3lw3_A           88 APIEIKQE-IYFNATITH---TSSKKSTIRVEGEFMEIKVFEGDFEILVF  133 (145)
T ss_dssp             SCCCTTCC-EEEEEEEEE---ECSSEEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred             CCCCCCCE-EEEEEEEEE---ECCCEEEEEEEEEECCEEEEEEEEEEEEE
T ss_conf             12489999-999999999---59949999999999999999999999998