HHsearch results for GI: 254780460 and protein with PDBid: 3lw3_A
>3lw3_A HP0420 homologue; hotdog-fold, structural genomics, unknown function; 1.60A {Helicobacter felis} PDB: 3lwg_A
Probab=93.30 E-value=0.41 Score=25.63 Aligned_cols=108 Identities=5% Similarity=-0.004 Sum_probs=62.6
Q ss_pred EEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEE
Q ss_conf 25689999718441342357887507865530045568995211275788879988640123346882667630451141
Q gi|254780460|r 36 MFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFR 115 (172)
Q Consensus 36 miDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr 115 (172)
+-=+++++++ |+++.+..++++ +.+. .-++-|-++.- ++-.+..+... .......-.+++|.
T Consensus 26 Lg~ei~~~~~-------G~~~~~l~v~~~--~~n~----~G~vHGG~i~t-l~D~a~~~a~~----~~~~vT~~~~i~fl 87 (145)
T 3lw3_A 26 LCAELISFGS-------GKATVCLTPKEF--MLCE----DDVVHAGFIVG-AASFAALCALN----KKNSLISSMKVNLL 87 (145)
T ss_dssp GSCEEEEEET-------TEEEEEECCCGG--GEEE----TTEECHHHHHH-HHHHHHHHHHC----CTTEEEEEEEEEEC
T ss_pred HCEEEEEEEC-------CEEEEEECCCHH--HHCC----CCCCCHHHEEH-HHHHHHHHHHC----CCCEEEEEEEEEEE
T ss_conf 2919999969-------989999739989--9297----89184102515-56542166537----78569711325882
Q ss_pred EEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEEEEEE
Q ss_conf 02337985799999988963078579999999999999999997106998
Q gi|254780460|r 116 GMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQANDLRVCL 165 (172)
Q Consensus 116 ~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~vgl 165 (172)
+++.+|+. ++.+.++.+ .++...+.+++++++++.+++++--++-+
T Consensus 88 ~p~~~G~~-l~a~A~vv~---~g~r~~~v~vev~~~d~~V~~gt~~~~v~ 133 (145)
T 3lw3_A 88 APIEIKQE-IYFNATITH---TSSKKSTIRVEGEFMEIKVFEGDFEILVF 133 (145)
T ss_dssp SCCCTTCC-EEEEEEEEE---ECSSEEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CCCCCCCE-EEEEEEEEE---ECCCEEEEEEEEEECCEEEEEEEEEEEEE
T ss_conf 12489999-999999999---59949999999999999999999999998