HHSEARCH alignment of GI: 254780460 and SCOP domain: d1sc0a_

Alignment
>d1sc0a_ d.38.1.5 (A:) Hypothetical protein HI1161 {Haemophilus influenzae [TaxId: 727]}
Probab=94.42  E-value=0.15  Score=26.88  Aligned_cols=126  Identities=14%  Similarity=0.014  Sum_probs=72.9

Q ss_pred             CCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHH
Q ss_conf             65589889998418835579988899864122568999971844134235788750786553004556899521127578
Q gi|254780460|r    5 KSSYTYEEILRCGEGEMFGEGNAQLPKPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGL   84 (172)
Q Consensus         5 ~~~f~~~~i~~~~~g~~fg~~~~rLP~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~i   84 (172)
                      |..++-|++.+.+++...           -+|==+++++++       |+++.+..+.++  +..   | ..++=|-.+.
T Consensus         3 kk~~~l~~l~~~~~~~~~-----------~~lG~~~~~~~~-------g~~~~~~~v~~~--~~n---~-~g~vHGG~l~   58 (137)
T d1sc0a_           3 KKTFTLENLNQLCSNSAV-----------SHLGIEISAFGE-------DWIEATMPVDHR--TMQ---P-FGVLHGGVSV   58 (137)
T ss_dssp             SSCCCHHHHHHHTCSSHH-----------HHTTCEEEEECS-------SCEEEEEECSTT--TBC---T-TSSBCHHHHH
T ss_pred             CCCCCHHHHHHHCCCCHH-----------HHCCCEEEEEEC-------CEEEEEEECCHH--HCC---C-CCEEECCCEE
T ss_conf             655789999754525288-----------855989999979-------999999990899--939---9-9836233111


Q ss_pred             HHHHHHH-HHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEEC-CEEEEEEEE
Q ss_conf             8879988-640123346882667630451141023379857999999889630785799999999999-999999971
Q gi|254780460|r   85 DALWQLT-GFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVN-GKEIYQAND  160 (172)
Q Consensus        85 Ea~~Ql~-~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vd-g~~i~~a~~  160 (172)
                       +++-.+ ++...............--++.|.+++.+|+  ++.+.+   +.+.++.+++++++++.+ |+++++++.
T Consensus        59 -al~D~~~~~a~~~~~~~~~~~~T~~l~v~flrp~~~g~--l~a~a~---v~~~Gr~~~~~e~~i~~~~g~lvA~a~~  130 (137)
T d1sc0a_          59 -ALAETIGSLAGSLCLEEGKTVVGLDINANHLRPVRSGK--VTARAT---PINLGRNIQVWQIDIRTEENKLCCVSRL  130 (137)
T ss_dssp             -HHHHHHHHHHHHHTSCTTCEEEEEEEEEEECSCCCSSE--EEEEEE---EEEECSSEEEEEEEEECTTSCEEEEEEE
T ss_pred             -EEHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEECCCCE--EEEEEE---EEECCCCEEEEEEEEEECCCCEEEEEEE
T ss_conf             -21577699999975211312574147999996158981--999999---9972861999999999189999999999


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: PaaI/YdiI-like
domain: Hypothetical protein HI1161
species: Haemophilus influenzae [TaxId: 727]