HHSEARCH alignment of GI: 254780460 and SCOP domain: d1vh9a_

Alignment
>d1vh9a_ d.38.1.5 (A:) Hypothetical protein YbdB {Escherichia coli [TaxId: 562]}
Probab=96.34  E-value=0.031  Score=30.90  Aligned_cols=126  Identities=17%  Similarity=0.083  Sum_probs=74.5

Q ss_pred             CCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEE-EEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHH
Q ss_conf             86558988999841883557998889986412256-89999718441342357887507865530045568995211275
Q gi|254780460|r    4 RKSSYTYEEILRCGEGEMFGEGNAQLPKPPMLMFH-RITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCL   82 (172)
Q Consensus         4 ~~~~f~~~~i~~~~~g~~fg~~~~rLP~~p~lmiD-rV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL   82 (172)
                      .|..++.|+|.+..++...            -.++ +++++++       |+++++..++++.  .+    ...++=|-.
T Consensus         4 ~~~~~tl~~l~~~~~~~~~------------~~LGi~~~~~~~-------g~~~~~~~v~~~~--~n----~~g~~HGG~   58 (138)
T d1vh9a_           4 WKRHLTLDELNATSDNTMV------------AHLGIVYTRLGD-------DVLEAEMPVDTRT--HQ----PFGLLHGGA   58 (138)
T ss_dssp             CSSCCCHHHHHHTSTTSHH------------HHTTCEEEEECS-------SCEEEEEECSTTT--BC----TTSSBCHHH
T ss_pred             CCCCCCHHHHHHHCCCHHH------------HHCCCEEEEEEC-------CEEEEEEECCHHH--CC----CCCCEECCH
T ss_conf             5477999999763723388------------856989999959-------9899999959999--29----998161405


Q ss_pred             HHHHHHHHHHHHCC-CCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE-CCEEEEEEEE
Q ss_conf             78887998864012-334688266763045114102337985799999988963078579999999999-9999999971
Q gi|254780460|r   83 GLDALWQLTGFFLG-WLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKV-NGKEIYQAND  160 (172)
Q Consensus        83 ~iEa~~Ql~~~~~~-~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v-dg~~i~~a~~  160 (172)
                      +. +++-.++.+.. ............--++.|.+++.+|+  ++.+.+   +.+.++.+++.+++++- +|+++++++-
T Consensus        59 ia-tl~D~~~~~a~~~~~~~~~~~vT~~l~v~flrp~~~g~--l~a~a~---v~~~Gr~~~~~e~~i~d~~g~lvA~a~~  132 (138)
T d1vh9a_          59 SA-ALAETLGSMAGFMMTRDGQCVVGTELNATHHRPVSEGK--VRGVCQ---PLHLGRQNQSWEIVVFDEQGRRCCTCRL  132 (138)
T ss_dssp             HH-HHHHHHHHHHHHTTCCTTCCEEEEEEEEEECSCCCSSE--EEEEEE---EEEECSSEEEEEEEEECTTSCEEEEEEE
T ss_pred             HH-HHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCE--EEEEEE---EEECCCCEEEEEEEEECCCCCEEEEEEE
T ss_conf             54-45778799999861345652130124326972168976--999999---9992788999999999289989999969


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: PaaI/YdiI-like
domain: Hypothetical protein YbdB
species: Escherichia coli [TaxId: 562]