HHSEARCH alignment of GI: 254780460 and SCOP domain: d2f41a1

Alignment
>d2f41a1 d.38.1.5 (A:73-183) Transcription factor FapR, C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=98.67  E-value=1.2e-07  Score=63.08  Aligned_cols=107  Identities=8%  Similarity=0.002  Sum_probs=78.0

Q ss_pred             EEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEE
Q ss_conf             25689999718441342357887507865530045568995211275788879988640123346882667630451141
Q gi|254780460|r   36 MFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFR  115 (172)
Q Consensus        36 miDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr  115 (172)
                      +|++|++++++.      +.++.++++++..++.+|++-.+++++.+-..+++++          +.........+++|+
T Consensus         2 liGeii~~~~g~------~a~~~~~v~~~~~~~~~g~~hGg~i~slad~~~~~~~----------~~~~~vt~~~~i~f~   65 (111)
T d2f41a1           2 VIGEIIDLELDD------QAISILEIKQEHVFSRNQIARGHHLFAQANSLAVAVI----------DDELALTASADIRFT   65 (111)
T ss_dssp             CSSEEEEEETTT------EEEEEEECCGGGBCSTTCBBCHHHHHHHHHHHHHHTC-------------CCCEEEEEEEEC
T ss_pred             CCEEEEEEECCC------EEEEEEECCHHHHCCCCCCCCCCCHHHHHHHHHHHHC----------CCCCEEEEEEEEEEE
T ss_conf             648999982895------5999998678990244488644151999999998642----------887389999878998


Q ss_pred             EEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEE
Q ss_conf             023379857999999889630785799999999999999999971
Q gi|254780460|r  116 GMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQAND  160 (172)
Q Consensus       116 ~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~  160 (172)
                      +++.|||. ++.+.++.+..++ ..++.++.+..++++++++++-
T Consensus        66 ~pv~~Gd~-l~a~a~v~~~~~~-~~~~~v~v~~~~~~~~V~~G~f  108 (111)
T d2f41a1          66 RQVKQGER-VVAKAKVTAVEKE-KGRTVVEVNSYVGEEIVFSGRF  108 (111)
T ss_dssp             SCCBTTCE-EEEEEEEEEECSS-SSCEEEEEEEEETTEEEEEEEE
T ss_pred             ECCCCCCE-EEEEEEEEEECCC-EEEEEEEEEEEECCEEEEEEEE
T ss_conf             72155734-9999999998783-7999999999989999999999


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: PaaI/YdiI-like
domain: Transcription factor FapR, C-terminal domain
species: Bacillus subtilis [TaxId: 1423]