RPSBLAST alignment for GI: 254780460 and conserved domain: cd01287
>gnl|CDD|48032 cd01287, FabA, FabA, beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase: Bacterial protein of the type II, fatty acid synthase system that binds ACP and catalyzes both dehydration and isomerization reactions, apparently in the same active site. The FabA structure is a homodimer with two independent active sites located at the dimer interface. Each active site is tunnel-shaped and completely inaccessible to solvent. No metal ions or cofactors are required for ligand binding or catalysis.. Length = 150
Score = 165 bits (420), Expect = 4e-42
Identities = 61/147 (41%), Positives = 81/147 (55%), Gaps = 8/147 (5%)
Query: 27 AQLPKPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDA 86
+LP +LM R+T+I GG + G +RAE DI P+ WFF CHF DPVMPG LGL+A
Sbjct: 1 PRLPGGQLLMLDRVTEIDPGGGTFGLGYLRAEKDIDPDDWFFPCHFHGDPVMPGSLGLEA 60
Query: 87 LWQLTGFFLGWLGE-------LGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILR-GR 138
+ QL F+L WLG +G K+RG +TP K V Y + K++ R G
Sbjct: 61 MIQLLQFYLIWLGLGTGVDNPRFQGAPGGPGEWKYRGQITPHNKKVTYEVHIKEVGRDGP 120
Query: 139 VVLGAADGWVKVNGKEIYQANDLRVCL 165
AD + V+G IY+A D+ V L
Sbjct: 121 RPYIIADASLWVDGLRIYEAKDIAVRL 147