HHsearch alignment for GI: 254780461 and conserved domain: PRK06059
>PRK06059 lipid-transfer protein; Provisional.
Probab=99.75 E-value=5.2e-17 Score=125.24 Aligned_cols=276 Identities=15% Similarity=0.170 Sum_probs=173.3
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999999997534101332222333320563256763014567788875125221232001223323567787763122
Q gi|254780461|r 72 GTWGHLAMQEAITDSRLQPCEITHERTGLIAGSGGPSTKCIVSAADLTREHCSTRRIGPFAVPKAMSSTASATLSTWFKI 151 (406)
Q Consensus 72 ~~l~l~aa~~Al~dAGl~~~~~~~~r~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~gl 151 (406)
T Consensus 24 ~~l~~eA~~~AL~DAGl~~~dVD----~v~~~~~~~~~-----------------------~~~~---~~~~~~a~~lGl 73 (399)
T PRK06059 24 TEYGVVAARAALADAGLDWRQVQ----LVAGADTIRNG-----------------------YPGF---VAGATFAQKLGW 73 (399)
T ss_pred HHHHHHHHHHHHHHCCCCHHHCC----EEEEECCCCCC-----------------------CCCC---CHHHHHHHHCCC
T ss_conf 99999999999985599989946----88430345667-----------------------7753---226999997599
Q ss_pred CC-CCCCCCCCCCCCCCCCCCEECCCCCCEEEEEEEECCCCCCCCCC-------------CCCCCCCC-------C-CC-
Q ss_conf 33-33333333444433432100113456055788731345667532-------------22222122-------3-34-
Q gi|254780461|r 152 RG-TSYSISSACATSAHCIGNAAELIQSGKQDIMFAGGQEDLDWTMS-------------NLFDAMGA-------M-SS- 208 (406)
Q Consensus 152 ~G-p~~ti~~acaSgl~Al~~A~~~L~~G~~D~aivGg~d~~~~~~~-------------~~f~~~~~-------l-s~- 208 (406)
T Consensus 74 ~g~p~~~v~~~~asG~~a~~~A~~~I~sG~~d~vlvvg~e~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~p~~~Al~a~r 153 (399)
T PRK06059 74 NGVPVTSSYAACASGSQALQSARAQILAGFCDVALVIGADTTPKGFFAPVGGERKNDPDWQRFHLIGATNTVYFALLARR 153 (399)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHH
T ss_conf 88631121162489999999999999849987899940335787654455455667711444301478508899999999
Q ss_pred ---------------------CCCCCCCCCC-CCCCC--------------CCCCEEECCCEEEEECCCHHHHCCCC--C
Q ss_conf ---------------------6786622322-23566--------------66641312651443112213201100--1
Q gi|254780461|r 209 ---------------------HFNHDPCSAS-RPYDS--------------RRDGFVISGGAAVIVLEEMERAKARG--A 250 (406)
Q Consensus 209 ---------------------~~~~~p~~~~-rPFd~--------------~~~G~~~gEGa~~~vLe~~~~A~~rG--a 250 (406)
T Consensus 154 ym~~yG~t~e~lA~vavk~~~~a~~NP~A~~r~~it~edvl~s~~Ia~PL~l~dc~~~sDGAaAvVl~s~e~A~~~~~~~ 233 (399)
T PRK06059 154 RMDLYGATVEDFAQVKVKNARHGLDNPNARYRKEVSVEDVLASPVVSDPLRLLDICATSDGAAALIVASKSFAEKHLGSV 233 (399)
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHCCCCHHHHCCCCCCCCCCCCCEEEEEEECHHHHHHHCCCC
T ss_conf 99997979999999999999877109286668998878872382645261551317888850899995599998722356
Q ss_pred CCCCEEEEEEEECCCCCCCC---CC-----------HH--HHHHHHHHHHHHH---HCCCCEEEECCCCCCCCCCCHHHH
Q ss_conf 12320122101026521234---43-----------35--7789887542100---100210221024555444200122
Q gi|254780461|r 251 KIYAELTGYGSTCDGDDMVS---PS-----------GE--GAIRCMRQALSSV---EEPVDYINTHGTATPKGDKKEVEA 311 (406)
Q Consensus 251 ~i~a~i~g~~~~~d~~~~~~---p~-----------~~--g~~~~i~~Al~~a---~~~i~~i~~hgtgt~~~D~~E~~a 311 (406)
T Consensus 234 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ay~~AGi~p~DiDvae~yD~ft~----~~l~~ 309 (399)
T PRK06059 234 AGVPSVRAISTVTPQYPQHLPELPDIATDSTAAVPAPERVFKDQILDAAYAEAGIGPEDLSLAEVYDLSTA----LELDW 309 (399)
T ss_pred CCCEEEEEEEEECCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHCCCCHHHCEEEEECCCCCH----HHHHH
T ss_conf 78839999984057544333233321222101023315567899999999982999788727753166609----89999
Q ss_pred HHCC------------------CCCCCCCCCCCCC--HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 2202------------------3554433647521--0132358999999999999987184078688888976678887
Q gi|254780461|r 312 IREV------------------FKGNIPYIQSTKS--LTGHSLGAAGAQEAIYCLIMMQERFIGESKNIEEIDPEFKGIP 371 (406)
Q Consensus 312 i~~~------------------f~~~~~~v~s~K~--~~GH~~gasG~~~~~~~~~~l~~g~ipp~~n~~~~~~~~~~l~ 371 (406)
T Consensus 310 lE~lGf~~~Ge~~~~v~~G~~~~~G~-lPvNtsGGlls~Ghp~gatG~~~~~E~~~QLrG~A-g---------------- 371 (399)
T PRK06059 310 YEHLGLCPKGEAEALLRSGATTLGGR-IPVNPSGGLACFGEAIPAQAIAQVCELTWQLRGQA-T---------------- 371 (399)
T ss_pred HHHCCCCCCCCHHHHHHCCCCCCCCC-CCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHCCCC-C----------------
T ss_conf 99849978983799997799667997-03558860211899661579999999999974887-6----------------
Q ss_pred CCCCCCCCCCCCEEEEECCCCCCEEEEEEEEE
Q ss_conf 37998855883589993556777367999994
Q gi|254780461|r 372 IVRKRIDNAKIDTVLSNSFGFGGTNATLVFRR 403 (406)
Q Consensus 372 ~v~~~~~~~~~~~al~~s~GfGG~n~~~vl~~ 403 (406)
T Consensus 372 --~rQV--~~a~~gl~~n~G~~~~~~~~~~~r 399 (399)
T PRK06059 372 --GRQV--EGAKVGITANQGLFGHGSSVIVAR 399 (399)
T ss_pred --CCCC--CCCCEEEECCCCCCCCCEEEEEEC
T ss_conf --7738--986178874778877732999859