HHsearch alignment for GI: 254780461 and conserved domain: PRK08304
>PRK08304 stage V sporulation protein AD; Validated.
Probab=97.04 E-value=0.0017 Score=40.87 Aligned_cols=173 Identities=20% Similarity=0.276 Sum_probs=99.9
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999999997534101332222333320563256763014567788875125221232001223323567787763122
Q gi|254780461|r 72 GTWGHLAMQEAITDSRLQPCEITHERTGLIAGSGGPSTKCIVSAADLTREHCSTRRIGPFAVPKAMSSTASATLSTWFKI 151 (406)
Q Consensus 72 ~~l~l~aa~~Al~dAGl~~~~~~~~r~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~gl 151 (406)
T Consensus 57 ~~m~~~A~~~al~Ka~l~~~d-----Id~~~aG------------DLlnQ-----------------~i~s~f~ar~l~I 102 (336)
T PRK08304 57 SKLMSDAIQQALQKANLKESD-----IDYLLAG------------DLLNQ-----------------TISANFVARELGI 102 (336)
T ss_pred HHHHHHHHHHHHHHCCCCHHH-----CEEEEEC------------HHHHH-----------------HHHHHHHHHHCCC
T ss_conf 999999999999974999778-----7389722------------24554-----------------6776677986599
Q ss_pred CCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC
Q ss_conf 33333333334444334321001134560557887313456675322222212233467866223222356666641312
Q gi|254780461|r 152 RGTSYSISSACATSAHCIGNAAELIQSGKQDIMFAGGQEDLDWTMSNLFDAMGAMSSHFNHDPCSASRPYDSRRDGFVIS 231 (406)
Q Consensus 152 ~Gp~~ti~~acaSgl~Al~~A~~~L~~G~~D~aivGg~d~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~~~G~~~g 231 (406)
T Consensus 103 --Pf~GlyGACST~~Esl~laa~~vdgg~A~~vla~tSSH~~t-AErQFR~--P~--Ey-----G~Qrp~tAqw--TV-- 166 (336)
T PRK08304 103 --PFLGLYGACSTMMESLALASMLIDGGFADRVLAATSSHFAT-AERQFRF--PT--EY-----GGQRPPTAQW--TV-- 166 (336)
T ss_pred --CEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHEECCCCCHH-HHHHCCC--CH--HC-----CCCCCCCCCE--EE--
T ss_conf --80102567788999999999998266364531002334203-6655158--03--20-----6779986517--88--
Q ss_pred CCEEEEECCCHHHHCC-CCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH---HCCCCEEEE
Q ss_conf 6514431122132011-0011232012210102652123443357789887542100---100210221
Q gi|254780461|r 232 GGAAVIVLEEMERAKA-RGAKIYAELTGYGSTCDGDDMVSPSGEGAIRCMRQALSSV---EEPVDYINT 296 (406)
Q Consensus 232 EGa~~~vLe~~~~A~~-rGa~i~a~i~g~~~~~d~~~~~~p~~~g~~~~i~~Al~~a---~~~i~~i~~ 296 (406)
T Consensus 167 TGaGa~il~~~~~~p~It~~T-iGkVvD~Gi~-D~~nMGaAMAPAA~dTI~~hf~Dtg~~p~dYDlIvT 233 (336)
T PRK08304 167 TGAGAVLLSKEGSGPKITYAT-IGKVIDYGIK-DPLDMGAAMAPAAADTIKQHFEDTGRTPEDYDLIVT 233 (336)
T ss_pred ECEEEEEEECCCCCCEEEEEE-EEEEEECCCC-CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCEEEE
T ss_conf 751799981389997798986-7888764888-843035555378999999999980999002348996