HHsearch alignment for GI: 254780461 and conserved domain: TIGR03150
>TIGR03150 fabF 3-oxoacyl-[acyl-carrier-protein] synthase 2. FabB sequences should fall well below the noise cutoff of this model.
Probab=100.00 E-value=0 Score=740.93 Aligned_cols=398 Identities=43% Similarity=0.661 Sum_probs=376.3
Q ss_pred CCEEEEEEEEECCCCCCHHHHHHHHHCCCCCCEECCCCCCCCCCEEECCE-ECCCHHHCCCHHHHHHCCHHHHHHHHHHH
Q ss_conf 72899933267088989999999998188762336775754785124540-14786684898999724999999999999
Q gi|254780461|r 2 RRVAVTGMGIVSSIGNNVSEVAISLREARSGITFSEDFAKFGFRCQVWGK-PLLNAAELIDRKAMRFLSQGGTWGHLAMQ 80 (406)
Q Consensus 2 ~rV~ItG~G~v~p~G~~~~e~w~~L~~G~sgi~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~r~~d~~~~l~l~aa~ 80 (406)
T Consensus 1 rrVaItG~g~~~P~g~~~~~~w~~L~~g~s~i~~~~~~d~~~~~~~~~g~v~~fd~~~~i~~~~a~~~dp~~~l~l~aa~ 80 (407)
T TIGR03150 1 RRVVVTGLGAVTPLGNGVEEFWENLLAGKSGIGPITRFDASDLPVKIAGEVKDFDPEDYIDKKEARRMDRFIQYALAAAK 80 (407)
T ss_pred CEEEEEECEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEECCCCHHHCCCHHHHHHCCHHHHHHHHHHH
T ss_conf 93999846778979799999999997399744436877864687756777278894665899999751999999999999
Q ss_pred HHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 97534101332222333320563256763014567788875125221232001223323567787763122333333333
Q gi|254780461|r 81 EAITDSRLQPCEITHERTGLIAGSGGPSTKCIVSAADLTREHCSTRRIGPFAVPKAMSSTASATLSTWFKIRGTSYSISS 160 (406)
Q Consensus 81 ~Al~dAGl~~~~~~~~r~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~gl~Gp~~ti~~ 160 (406)
T Consensus 81 ~Al~dAG~~~~~~~~~~~gv~~gs~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~a~~is~~~~l~Gp~~tv~t 159 (407)
T TIGR03150 81 EAVEDSGLDIEEEDAERVGVIVGSGIGGLETIEEQHIVLLEK-GPRRVSPFFIPMSIINMAAGQISIRYGAKGPNHAVVT 159 (407)
T ss_pred HHHHHCCCCHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHC-CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
T ss_conf 999863998445286645999925767457799999999853-8444585401576625899999998599996446444
Q ss_pred CCCCCCCCCCCEECCCCCCEEEEEEEECCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEC
Q ss_conf 3444433432100113456055788731345-667532222221223346786622322235666664131265144311
Q gi|254780461|r 161 ACATSAHCIGNAAELIQSGKQDIMFAGGQED-LDWTMSNLFDAMGAMSSHFNHDPCSASRPYDSRRDGFVISGGAAVIVL 239 (406)
Q Consensus 161 acaSgl~Al~~A~~~L~~G~~D~aivGg~d~-~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~~~G~~~gEGa~~~vL 239 (406)
T Consensus 160 aCsSsl~Al~~A~~~i~~G~~d~aivGG~~~~l~~~~~~~f~~~~~ls~~-~~~p~~~~rPFD~~a~G~v~gEGa~~vvL 238 (407)
T TIGR03150 160 ACATGTHAIGDAFRLIQYGDADVMIAGGAEAAITPLGIAGFAAMKALSTR-NDDPEKASRPFDKDRDGFVMGEGAGVLVL 238 (407)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCC-CCCCCCCCCCCCCCCCCCCCCCCEEEEEE
T ss_conf 43899999999999987398546550374435798999999988777306-78987776542247997445484578740
Q ss_pred CCHHHHCCCCCCCCCEEEEEEEECCCCCCCCC--CHHHHHHHHHHHHHHH---HCCCCEEEECCCCCCCCCCCHHHHHHC
Q ss_conf 22132011001123201221010265212344--3357789887542100---100210221024555444200122220
Q gi|254780461|r 240 EEMERAKARGAKIYAELTGYGSTCDGDDMVSP--SGEGAIRCMRQALSSV---EEPVDYINTHGTATPKGDKKEVEAIRE 314 (406)
Q Consensus 240 e~~~~A~~rGa~i~a~i~g~~~~~d~~~~~~p--~~~g~~~~i~~Al~~a---~~~i~~i~~hgtgt~~~D~~E~~ai~~ 314 (406)
T Consensus 239 e~~~~A~~~g~~I~a~i~g~g~~~d~~~~t~~~p~~~~~~~~i~~al~~agi~~~~I~yIe~Hgtgt~~~D~~E~~al~~ 318 (407)
T TIGR03150 239 EELEHAKARGAKIYAEIVGYGMSGDAYHITAPAPEGEGAARAMRAALKDAGINPEDVDYINAHGTSTPLGDKAETKAIKR 318 (407)
T ss_pred CCHHHHHHCCCEEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHH
T ss_conf 66999987799689998210550158876465998167888999999986899863349997368787769999999999
Q ss_pred CCCCC--CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC
Q ss_conf 23554--4336475210132358999999999999987184078688888976678887379988558835899935567
Q gi|254780461|r 315 VFKGN--IPYIQSTKSLTGHSLGAAGAQEAIYCLIMMQERFIGESKNIEEIDPEFKGIPIVRKRIDNAKIDTVLSNSFGF 392 (406)
Q Consensus 315 ~f~~~--~~~v~s~K~~~GH~~gasG~~~~~~~~~~l~~g~ipp~~n~~~~~~~~~~l~~v~~~~~~~~~~~al~~s~Gf 392 (406)
T Consensus 319 ~fg~~~~~~~i~S~K~~~GH~~~AaG~~~lik~~l~l~~~~ipp~~n~~~~~~~~~-~~~v~~~~~~~~~~~al~~sfGf 397 (407)
T TIGR03150 319 VFGDHAYKLAVSSTKSMTGHLLGAAGAIEAIFTVLAIRDGVVPPTINLDNPDPECD-LDYVPNEARERKIDYALSNSFGF 397 (407)
T ss_pred HHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCEEEEECCCC
T ss_conf 86256898657885555431489999999999999982596389899899999998-45188988678889999967236
Q ss_pred CCEEEEEEEE
Q ss_conf 7736799999
Q gi|254780461|r 393 GGTNATLVFR 402 (406)
Q Consensus 393 GG~n~~~vl~ 402 (406)
T Consensus 398 GG~Na~~vl~ 407 (407)
T TIGR03150 398 GGHNASLVFK 407 (407)
T ss_pred CCEEEEEEEC
T ss_conf 7354899969