HHsearch alignment for GI: 254780461 and conserved domain: cd00751
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.85 E-value=1.4e-20 Score=147.52 Aligned_cols=265 Identities=21% Similarity=0.328 Sum_probs=174.7
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999975341013322223333205632567630145677888751252212320012233235677877631
Q gi|254780461|r 70 QGGTWGHLAMQEAITDSRLQPCEITHERTGLIAGSGGPSTKCIVSAADLTREHCSTRRIGPFAVPKAMSSTASATLSTWF 149 (406)
Q Consensus 70 ~~~~l~l~aa~~Al~dAGl~~~~~~~~r~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~ 149 (406)
T Consensus 21 ~~~~L~~~ai~~al~~agl~~~~Id~----vi~G~~~~~g~g---------------------------~n~aR~~al~a 69 (386)
T cd00751 21 SADDLGAAVIKALLERAGLDPEEVDD----VIMGNVLQAGEG---------------------------QNPARQAALLA 69 (386)
T ss_pred CHHHHHHHHHHHHHHHCCCCHHHCCE----EEEEECCCCCCC---------------------------CCHHHHHHHHC
T ss_conf 89999999999999984989899998----999950666656---------------------------63999999976
Q ss_pred CC--CCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEEEECCCCCCCCCCCCC---------------------------
Q ss_conf 22--3333333333444433432100113456055788731345667532222---------------------------
Q gi|254780461|r 150 KI--RGTSYSISSACATSAHCIGNAAELIQSGKQDIMFAGGQEDLDWTMSNLF--------------------------- 200 (406)
Q Consensus 150 gl--~Gp~~ti~~acaSgl~Al~~A~~~L~~G~~D~aivGg~d~~~~~~~~~f--------------------------- 200 (406)
T Consensus 70 Glp~~vp~~tV~~aCaSG~~Ai~~A~~~I~sG~~dvvla~GvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (386)
T cd00751 70 GLPESVPATTVNRVCGSGLQAVALAAQSIAAGEADVVVAGGVESMSRAPYLLPKARRGGRLGLNTLDGMLDDGLTDPFTG 149 (386)
T ss_pred CCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99988865888422168799999997411079977888724453565753456555555456552200134344465555
Q ss_pred CCCCC----CCCCCC-------------------------------------------CCCCC------------CCC-C
Q ss_conf 22122----334678-------------------------------------------66223------------222-3
Q gi|254780461|r 201 DAMGA----MSSHFN-------------------------------------------HDPCS------------ASR-P 220 (406)
Q Consensus 201 ~~~~~----ls~~~~-------------------------------------------~~p~~------------~~r-P 220 (406)
T Consensus 150 ~~Mg~~Ae~~a~~~gitRe~~D~~A~~Sh~~A~~A~~~g~f~~ei~pv~~~~~~~~~~~~~De~~R~~~t~e~l~~l~p~ 229 (386)
T cd00751 150 LSMGITAENVAEKYGISREEQDEFALRSHQRAAAAQEAGRFKDEIVPVEVPGRKGPVVVDRDEGPRPDTTLEKLAKLKPA 229 (386)
T ss_pred CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHCCCCCCHHHHHHCCCC
T ss_conf 77799999999985989999999999999999999873997011566774267777666802311668887788338763
Q ss_pred CCCCC-----CCEEECCCEEEEECCCHHHHCCCCCCCCCEEEEEEEECCCCCCCCCC--HHHHHHHHHHHHHHH---HCC
Q ss_conf 56666-----64131265144311221320110011232012210102652123443--357789887542100---100
Q gi|254780461|r 221 YDSRR-----DGFVISGGAAVIVLEEMERAKARGAKIYAELTGYGSTCDGDDMVSPS--GEGAIRCMRQALSSV---EEP 290 (406)
Q Consensus 221 Fd~~~-----~G~~~gEGa~~~vLe~~~~A~~rGa~i~a~i~g~~~~~d~~~~~~p~--~~g~~~~i~~Al~~a---~~~ 290 (406)
T Consensus 230 f~~~g~vTagn~s~~sDGAAAvvl~s~~~a~~~g~~p~a~i~~~~~~~~-----dp~~~~~~p~~A~~~al~~agl~~~D 304 (386)
T cd00751 230 FKKDGTVTAGNASGINDGAAAVLLMSEEKAKELGLKPLARIVGYAVAGV-----DPAIMGIGPVPAIPKALKRAGLTLDD 304 (386)
T ss_pred CCCCCCEECCCCCCCCCHHHHHHHHCHHHHHHCCCCEEEEEEEECCCCC-----CHHHHCCCHHHHHHHHHHHCCCCHHH
T ss_conf 1479826777557666478999874699999769970699997412212-----87886627999999999983998444
Q ss_pred CCEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCC--HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 21022102455544420012222023554433647521--0132358999999999999987184078688888976678
Q gi|254780461|r 291 VDYINTHGTATPKGDKKEVEAIREVFKGNIPYIQSTKS--LTGHSLGAAGAQEAIYCLIMMQERFIGESKNIEEIDPEFK 368 (406)
Q Consensus 291 i~~i~~hgtgt~~~D~~E~~ai~~~f~~~~~~v~s~K~--~~GH~~gasG~~~~~~~~~~l~~g~ipp~~n~~~~~~~~~ 368 (406)
T Consensus 305 id~~EiheaFa~----~~l~~~~~-lg~~~~~vN~~GG~ia~GHP~GATG~~~~~~l~~~L~~~---------------- 363 (386)
T cd00751 305 IDLIEINEAFAA----QALACLKE-LGLDPEKVNVNGGAIALGHPLGASGARIVVTLLHELKRR---------------- 363 (386)
T ss_pred CCEEEEEHHHHH----HHHHHHHH-HCCCHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHH----------------
T ss_conf 884351056687----89999998-298776678885598609980215899999999999883----------------
Q ss_pred CCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEEE
Q ss_conf 88737998855883589993556777367999994
Q gi|254780461|r 369 GIPIVRKRIDNAKIDTVLSNSFGFGGTNATLVFRR 403 (406)
Q Consensus 369 ~l~~v~~~~~~~~~~~al~~s~GfGG~n~~~vl~~ 403 (406)
T Consensus 364 ------------~g~~gl~s~c~~gG~g~a~~ier 386 (386)
T cd00751 364 ------------GGRYGLATMCIGGGQGAAMVIER 386 (386)
T ss_pred ------------CCCEEEEEECCCCCEEEEEEEEC
T ss_conf ------------89889999733455067999979