HHsearch alignment for GI: 254780461 and conserved domain: cd00826
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.77 E-value=2.3e-18 Score=133.69 Aligned_cols=248 Identities=19% Similarity=0.290 Sum_probs=153.4
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 49999999999999753410133222233332056325676301456778887512522123200122332356778776
Q gi|254780461|r 68 LSQGGTWGHLAMQEAITDSRLQPCEITHERTGLIAGSGGPSTKCIVSAADLTREHCSTRRIGPFAVPKAMSSTASATLST 147 (406)
Q Consensus 68 ~d~~~~l~l~aa~~Al~dAGl~~~~~~~~r~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~ 147 (406)
T Consensus 20 ~~~a~eL~~~ai~~al~~agi~~~~Id~----vi~G~~~~~g~g~---------------------------n~ar~~~l 68 (393)
T cd00826 20 NDLAHEAGAKAIAAALEPAGVAAGAVEE----ACLGQVLGAGEGQ---------------------------NCAQQAAM 68 (393)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCHHHCCE----EEEEECCCCCCCC---------------------------CHHHHHHH
T ss_conf 8999999999999999982969899898----9999258755554---------------------------19999999
Q ss_pred H--HCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEEEECCCCCCCCCCC---------------------CC--CC
Q ss_conf 3--12233333333334444334321001134560557887313456675322---------------------22--22
Q gi|254780461|r 148 W--FKIRGTSYSISSACATSAHCIGNAAELIQSGKQDIMFAGGQEDLDWTMSN---------------------LF--DA 202 (406)
Q Consensus 148 ~--~gl~Gp~~ti~~acaSgl~Al~~A~~~L~~G~~D~aivGg~d~~~~~~~~---------------------~f--~~ 202 (406)
T Consensus 69 ~ag~~~~vp~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvlagGvEsms~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~s 148 (393)
T cd00826 69 HAGGLQEAPAIGMNNLCGSGLRALALAMQLIAGGDANCILAGGFEKMETSAENNAKEKHIDVLINKYGMRACPDAFALAG 148 (393)
T ss_pred HCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCHHCCHHHHHHH
T ss_conf 75999899768876847899999999999997699998999505506767643546666888876328831236999999
Q ss_pred C---------CC----C---C--CC-----CCCCCCC------------CCCC-CCCC-----CCCEEECCCEEEEECCC
Q ss_conf 1---------22----3---3--46-----7866223------------2223-5666-----66413126514431122
Q gi|254780461|r 203 M---------GA----M---S--SH-----FNHDPCS------------ASRP-YDSR-----RDGFVISGGAAVIVLEE 241 (406)
Q Consensus 203 ~---------~~----l---s--~~-----~~~~p~~------------~~rP-Fd~~-----~~G~~~gEGa~~~vLe~ 241 (406)
T Consensus 149 ~~~~~~a~~~G~~~e~~a~v~v~~~~~~~~~~~n~~a~~~~~~tle~~~~l~pv~~~~g~lta~n~s~~sDGAAA~vl~s 228 (393)
T cd00826 149 QAGAEAAEKDGRFKDEFAKFGVKGRKGDIHSDADEYIQFGDEASLDEIAKLRPAFDKEDFLTAGNACGLNDGAAAAILMS 228 (393)
T ss_pred HHHHHHHHHHCCCHHHHCCEEEECCCCCEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC
T ss_conf 99999999829977772305550675746521453334587768888961688645577532445678888417899943
Q ss_pred HHHHCCCCCCC-------CCEEEEEEEECCCCCCC-CCCHHHHHHHHHHHHHHH---HCCCCEEEECCCCCCCCCCCHHH
Q ss_conf 13201100112-------32012210102652123-443357789887542100---10021022102455544420012
Q gi|254780461|r 242 MERAKARGAKI-------YAELTGYGSTCDGDDMV-SPSGEGAIRCMRQALSSV---EEPVDYINTHGTATPKGDKKEVE 310 (406)
Q Consensus 242 ~~~A~~rGa~i-------~a~i~g~~~~~d~~~~~-~p~~~g~~~~i~~Al~~a---~~~i~~i~~hgtgt~~~D~~E~~ 310 (406)
T Consensus 229 e~~a~~~g~~~~~~~i~~~~~i~~~~~~~~~p~~~~~~~~~~p~~A~~~al~~aGl~~~Did~~Ei~eaFa~----~~l~ 304 (393)
T cd00826 229 EAEAQKHGLQSKAREIQALEMITDMASTFEDKKVIKMVGGDGPIEAARKALEKAGLGIGDLDLIEAHDAFAA----NACA 304 (393)
T ss_pred HHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCHH----HHHH
T ss_conf 999997389641023112699997560232841010124331899999999982998001664563242349----9999
Q ss_pred HHHCC-C-----------------CCCCCCCCCCCC--HHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 22202-3-----------------554433647521--01323589999999999999871
Q gi|254780461|r 311 AIREV-F-----------------KGNIPYIQSTKS--LTGHSLGAAGAQEAIYCLIMMQE 351 (406)
Q Consensus 311 ai~~~-f-----------------~~~~~~v~s~K~--~~GH~~gasG~~~~~~~~~~l~~ 351 (406)
T Consensus 305 ~~e~lg~~~~g~~~~~~~~g~~~~~g~~-pvN~~GG~ia~GHP~GAtG~~~~~~l~~qLr~ 364 (393)
T cd00826 305 TNEALGLCPEGQGGALVDRGDNTYGGKS-IINPNGGAIAIGHPIGASGAAICAELCFELKG 364 (393)
T ss_pred HHHHCCCCCCCCHHHHHHCCCCCCCCCC-EECCCHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf 9998098912231355540454458984-38777458770983635799999999999976