HHsearch alignment for GI: 254780461 and conserved domain: cd00830
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=99.56 E-value=1.1e-13 Score=104.48 Aligned_cols=282 Identities=19% Similarity=0.238 Sum_probs=161.8
Q ss_pred EEEEEEEEECCCC-CCHHHHHHHHHCCCCCCEECCCCCCCCCCEEECCEECCCHHHCCCHHHHHHCCHHHHHHHHHHHHH
Q ss_conf 8999332670889-899999999981887623367757547851245401478668489899972499999999999997
Q gi|254780461|r 4 VAVTGMGIVSSIG-NNVSEVAISLREARSGITFSEDFAKFGFRCQVWGKPLLNAAELIDRKAMRFLSQGGTWGHLAMQEA 82 (406)
Q Consensus 4 V~ItG~G~v~p~G-~~~~e~w~~L~~G~sgi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~d~~~~l~l~aa~~A 82 (406)
T Consensus 2 ~~I~~~g~y~P~~~v~n~~~~~~~--g~~---~~~i~~~~Gi~~R~~a~~~---------------e~~~~ma~~Aa~~a 61 (320)
T cd00830 2 ARILGIGSYLPERVVTNDELEKRL--DTS---DEWIRTRTGIRERRIADPG---------------ETTSDLAVEAAKKA 61 (320)
T ss_pred CEEEEEEEECCCCEECHHHHHHHH--CCC---HHHHHHCCCCEEEEECCCC---------------CCHHHHHHHHHHHH
T ss_conf 789999997799378499999886--989---8999870297489988999---------------99999999999999
Q ss_pred HHHHCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC-CCCCCCCCC
Q ss_conf 5341013322223333205632567630145677888751252212320012233235677877631223-333333333
Q gi|254780461|r 83 ITDSRLQPCEITHERTGLIAGSGGPSTKCIVSAADLTREHCSTRRIGPFAVPKAMSSTASATLSTWFKIR-GTSYSISSA 161 (406)
Q Consensus 83 l~dAGl~~~~~~~~r~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~gl~-Gp~~ti~~a 161 (406)
T Consensus 62 L~~ag~~~~dIdl----li~~s~~~~------------------~~----~----P-~~a~~v~~~LGl~~~~~fdi~~~ 110 (320)
T cd00830 62 LEDAGIDADDIDL----IIVATSTPD------------------YL----F----P-ATACLVQARLGAKNAAAFDINAA 110 (320)
T ss_pred HHHCCCCCCCCCE----EEEECCCCC------------------CC----C----C-CHHHHHHHHHCCCCCCEECCCCC
T ss_conf 9866989567888----999415689------------------86----8----8-39999999968899722510455
Q ss_pred CCCCCCCCCCEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEECCC
Q ss_conf 44443343210011345605578873134566753222222122334678662232223566666413126514431122
Q gi|254780461|r 162 CATSAHCIGNAAELIQSGKQDIMFAGGQEDLDWTMSNLFDAMGAMSSHFNHDPCSASRPYDSRRDGFVISGGAAVIVLEE 241 (406)
Q Consensus 162 caSgl~Al~~A~~~L~~G~~D~aivGg~d~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~~~G~~~gEGa~~~vLe~ 241 (406)
T Consensus 111 C~g~~~aL~~A~~~i~~g~~~~~Lvv~~e~~s~~~----------------~-------~~~~~~~~lfGDgaaA~ll~~ 167 (320)
T cd00830 111 CSGFLYGLSTAAGLIRSGGAKNVLVVGAETLSRIL----------------D-------WTDRSTAVLFGDGAGAVVLEA 167 (320)
T ss_pred CCHHHHHHHHHHHHHHCCCCCEEEEEECHHHCCCC----------------C-------CCCCCHHHCCCCCCEEEEEEE
T ss_conf 11589999999999855987616998413422554----------------5-------466211110378634899962
Q ss_pred HHHHCCCCCCCCCEEEEEEEECCCC-----CC------------------CCCCHHH--------HHHHHHHHHHHH---
Q ss_conf 1320110011232012210102652-----12------------------3443357--------789887542100---
Q gi|254780461|r 242 MERAKARGAKIYAELTGYGSTCDGD-----DM------------------VSPSGEG--------AIRCMRQALSSV--- 287 (406)
Q Consensus 242 ~~~A~~rGa~i~a~i~g~~~~~d~~-----~~------------------~~p~~~g--------~~~~i~~Al~~a--- 287 (406)
T Consensus 168 ~~~~~----~i----~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~ 239 (320)
T cd00830 168 TEEDP----GI----LDSVLGSDGSGADLLTIPAGGSRSPFEDAEGGDPYLVMDGREVFKFAVRLMPESIEEALEKAGLT 239 (320)
T ss_pred CCCCC----CE----EEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 48888----42----46899970688652684589766776433356761797328999988765699999999985999
Q ss_pred HCCCCEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 10021022102455544420012222023554433647521013235899999999999998718407868888897667
Q gi|254780461|r 288 EEPVDYINTHGTATPKGDKKEVEAIREVFKGNIPYIQSTKSLTGHSLGAAGAQEAIYCLIMMQERFIGESKNIEEIDPEF 367 (406)
Q Consensus 288 ~~~i~~i~~hgtgt~~~D~~E~~ai~~~f~~~~~~v~s~K~~~GH~~gasG~~~~~~~~~~l~~g~ipp~~n~~~~~~~~ 367 (406)
T Consensus 240 ~~did~~v~Hq~~~~~-----~~~~~~~lgi~~~k~~~~~~~~GN~~sasi~~~L~---~~~~~g~l~~----------- 300 (320)
T cd00830 240 PDDIDWFVPHQANLRI-----IEAVAKRLGLPEEKVVVNLDRYGNTSAASIPLALD---EAIEEGKLKK----------- 300 (320)
T ss_pred CCCCCEEEEECCCHHH-----HHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHH---HHHHCCCCCC-----------
T ss_conf 1016579970687899-----99999980969899675685107558768999999---9997499998-----------
Q ss_pred CCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEE
Q ss_conf 888737998855883589993556777367999
Q gi|254780461|r 368 KGIPIVRKRIDNAKIDTVLSNSFGFGGTNATLV 400 (406)
Q Consensus 368 ~~l~~v~~~~~~~~~~~al~~s~GfGG~n~~~v 400 (406)
T Consensus 301 --------------Gd~vll~~~G~G~s~g~~~ 319 (320)
T cd00830 301 --------------GDLVLLLGFGAGLTWGAAL 319 (320)
T ss_pred --------------CCEEEEEEECHHHHHHHHH
T ss_conf --------------5999999980453253202