HHsearch alignment for GI: 254780461 and conserved domain: pfam01154
>pfam01154 HMG_CoA_synt_N Hydroxymethylglutaryl-coenzyme A synthase N terminal.
Probab=96.66 E-value=0.0025 Score=39.83 Aligned_cols=91 Identities=18% Similarity=0.165 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999975341013322223333205632567630145677888751252212320012233235677877631
Q gi|254780461|r 70 QGGTWGHLAMQEAITDSRLQPCEITHERTGLIAGSGGPSTKCIVSAADLTREHCSTRRIGPFAVPKAMSSTASATLSTWF 149 (406)
Q Consensus 70 ~~~~l~l~aa~~Al~dAGl~~~~~~~~r~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~ 149 (406)
T Consensus 49 D~vTmAanAa~~ll~~~~i~~~~Ig~----l~vgTES~iD~S-----------------K----------s~~t~l~~ll 97 (171)
T pfam01154 49 DINSLCLTVVQKLMERNNLDYDCIGR----LEVGTETIIDKS-----------------K----------SVKTVLMQLF 97 (171)
T ss_pred CHHHHHHHHHHHHHHHCCCCHHHCCE----EEECCCCCCCCC-----------------C----------CHHHHHHHHH
T ss_conf 79999999999999873999888407----996377645665-----------------5----------6899999983
Q ss_pred CCCCCC----CCCCCCCCCCCCCCCCEECCCCCCEEE--EEEEECCCC
Q ss_conf 223333----333333444433432100113456055--788731345
Q gi|254780461|r 150 KIRGTS----YSISSACATSAHCIGNAAELIQSGKQD--IMFAGGQED 191 (406)
Q Consensus 150 gl~Gp~----~ti~~acaSgl~Al~~A~~~L~~G~~D--~aivGg~d~ 191 (406)
T Consensus 98 ~~~~~~~~~~~e~k~ACyggTaAL~~a~~~v~s~~~~~k~alVV~sDi 145 (171)
T pfam01154 98 EESGNTDIEGIDTTNACYGGTAALFNALNWIESSSWDGRYALVVAGDI 145 (171)
T ss_pred CCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECC
T ss_conf 765788740333001069899999999999982887896399998410