HHsearch alignment for GI: 254780462 and conserved domain: COG1089
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane].
Probab=98.55 E-value=1.9e-07 Score=65.21 Aligned_cols=212 Identities=16% Similarity=0.036 Sum_probs=137.7
Q ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCHHH--HH--HHHHHHHCCCC-EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 8878999388988525899999999899889999489789--99--99999851596-4999877999999999999999
Q gi|254780462|r 6 KGKRGLIMGVANDHSIAWGIAKVLHSAGAQLAFSYQGESI--GK--RLKPLALTVDS-DFMIPCNVEDPSSMDLLFERIK 80 (267)
Q Consensus 6 ~gK~~lItGas~~~GIG~aia~~l~~~Ga~V~i~~~~~~~--~~--~~~~l~~~~~~-~~~~~~Dv~~~~~v~~~~~~~~ 80 (267)
T Consensus 1 ~~K~ALITGITGQ--DGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v- 77 (345)
T COG1089 1 MGKVALITGITGQ--DGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV- 77 (345)
T ss_pred CCCEEEEECCCCC--CHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHC-
T ss_conf 9726999544587--5389999998569489878603355776530111165557861799965543568899999860-
Q ss_pred HHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCC-CCCCEEEEEEEE--EE--------
Q ss_conf 9837988999368331776555761257999997765016611232221002224-468416898875--20--------
Q gi|254780462|r 81 ERWETLDFVVHSIAFSDKNELRGPYYNTSRDNFIQTMLVSCFSFTEIVRRAAQLM-PHGGAMITLTYG--GS-------- 149 (267)
Q Consensus 81 ~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~e~~~~~~~vn~~~~~~~~~~~~~~~-~~~G~II~isS~--~~-------- 149 (267)
T Consensus 78 ----~PdEIYNLaAQS--------~V~vSFe~P~~T~~~~~iGtlrlLEai-R~~~~~~~rfYQAStSE~fG~v~~~pq~ 144 (345)
T COG1089 78 ----QPDEIYNLAAQS--------HVGVSFEQPEYTADVDAIGTLRLLEAI-RILGEKKTRFYQASTSELYGLVQEIPQK 144 (345)
T ss_pred ----CCHHHEECCCCC--------CCCCCCCCCCEEEEECHHHHHHHHHHH-HHHCCCCCEEEECCCHHHHCCCCCCCCC
T ss_conf ----944533034323--------455303586402531006788999999-9748766079965617760676667544
Q ss_pred -CCCCCCCCCCHHHHHHHHHHHHHHHHHHHH---HCCEEEEECCCCCCCHHHHCCCCCHHHHH-------HHHHCCCCCC
Q ss_conf -145643210000015677631477998421---08589756228726855750798479999-------9982688998
Q gi|254780462|r 150 -MRVVPNYNAMAPAKSALESSTKYLACDYGG---MNIRINAISAGPVRTLAGASISNGRDIAA-------WSKENSPLKR 218 (267)
Q Consensus 150 -~~~~~~~~~Y~asKaal~~ltr~lA~El~~---~gIrVNaIaPG~i~T~~~~~~~~~~~~~~-------~~~~~~Pl~r 218 (267)
T Consensus 145 E~TPFyPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRD 224 (345)
T COG1089 145 ETTPFYPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRD 224 (345)
T ss_pred CCCCCCCCCHHHHHHHHHHHEEEEHHHHCCCEEECCEEECCCCCCCCCCEEHHHHHHHHHHHHCCCCCEEEECCCCCCCC
T ss_conf 68999889778899987776030147634733431144337898775310338999999998706612687436331023
Q ss_pred CCCHHHHHHHHHHHH
Q ss_conf 766999999999861
Q gi|254780462|r 219 TVSLEDIGNSALYLL 233 (267)
Q Consensus 219 ~~~~edva~~v~fL~ 233 (267)
T Consensus 225 WG~A~DYVe~mwlmL 239 (345)
T COG1089 225 WGHAKDYVEAMWLML 239 (345)
T ss_pred CCCHHHHHHHHHHHH
T ss_conf 431678999999997