HHsearch alignment for GI: 254780462 and conserved domain: PRK00141

>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=95.13  E-value=0.16  Score=29.03  Aligned_cols=75  Identities=20%  Similarity=0.317  Sum_probs=43.9

Q ss_pred             CCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf             56887899938898852589999999989988999948978999999998515964999877999999999999999983
Q gi|254780462|r    4 ILKGKRGLIMGVANDHSIAWGIAKVLHSAGAQLAFSYQGESIGKRLKPLALTVDSDFMIPCNVEDPSSMDLLFERIKERW   83 (267)
Q Consensus         4 ~L~gK~~lItGas~~~GIG~aia~~l~~~Ga~V~i~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (267)
T Consensus        15 ~l~~k-vlV~GlG-~--SG~s~a~~L~~~G~~v~~~D~~~~~~~~--~~~~~~~~~~~~----~----------~~~~~~   74 (476)
T PRK00141         15 ALRGR-VLVAGAG-V--SGLGIAKMLSELGCDVVVADDNETQRHM--LIEVVDVADIST----A----------QASDAL   74 (476)
T ss_pred             HHCCC-EEEEEEC-H--HHHHHHHHHHHCCCEEEEEECCCCHHHH--HHHHCCCCEECC----C----------CHHHHH
T ss_conf             86998-8999227-8--8999999999789979999899870357--887479856515----5----------306564


Q ss_pred             CCCCEEEECCCCCCC
Q ss_conf             798899936833177
Q gi|254780462|r   84 ETLDFVVHSIAFSDK   98 (267)
Q Consensus        84 g~iD~lVnnAg~~~~   98 (267)
T Consensus        75 ~~~d~vV~SPGI~~~   89 (476)
T PRK00141         75 DSYSIVVTSPGWRPD   89 (476)
T ss_pred             CCCCEEEECCCCCCC
T ss_conf             689999989978997