HHsearch alignment for GI: 254780462 and conserved domain: PRK00141
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=95.13 E-value=0.16 Score=29.03 Aligned_cols=75 Identities=20% Similarity=0.317 Sum_probs=43.9
Q ss_pred CCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 56887899938898852589999999989988999948978999999998515964999877999999999999999983
Q gi|254780462|r 4 ILKGKRGLIMGVANDHSIAWGIAKVLHSAGAQLAFSYQGESIGKRLKPLALTVDSDFMIPCNVEDPSSMDLLFERIKERW 83 (267)
Q Consensus 4 ~L~gK~~lItGas~~~GIG~aia~~l~~~Ga~V~i~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 83 (267)
T Consensus 15 ~l~~k-vlV~GlG-~--SG~s~a~~L~~~G~~v~~~D~~~~~~~~--~~~~~~~~~~~~----~----------~~~~~~ 74 (476)
T PRK00141 15 ALRGR-VLVAGAG-V--SGLGIAKMLSELGCDVVVADDNETQRHM--LIEVVDVADIST----A----------QASDAL 74 (476)
T ss_pred HHCCC-EEEEEEC-H--HHHHHHHHHHHCCCEEEEEECCCCHHHH--HHHHCCCCEECC----C----------CHHHHH
T ss_conf 86998-8999227-8--8999999999789979999899870357--887479856515----5----------306564
Q ss_pred CCCCEEEECCCCCCC
Q ss_conf 798899936833177
Q gi|254780462|r 84 ETLDFVVHSIAFSDK 98 (267)
Q Consensus 84 g~iD~lVnnAg~~~~ 98 (267)
T Consensus 75 ~~~d~vV~SPGI~~~ 89 (476)
T PRK00141 75 DSYSIVVTSPGWRPD 89 (476)
T ss_pred CCCCEEEECCCCCCC
T ss_conf 689999989978997