HHsearch alignment for GI: 254780462 and conserved domain: PRK05876

Probab=100.00  E-value=0  Score=334.82  Aligned_cols=224  Identities=16%  Similarity=0.155  Sum_probs=188.2

Q ss_pred             CCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf             875688789993889885258999999998998899994897899-9999998515964999877999999999999999
Q gi|254780462|r    2 INILKGKRGLIMGVANDHSIAWGIAKVLHSAGAQLAFSYQGESIG-KRLKPLALTVDSDFMIPCNVEDPSSMDLLFERIK   80 (267)
Q Consensus         2 m~~L~gK~~lItGas~~~GIG~aia~~l~~~Ga~V~i~~~~~~~~-~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   80 (267)
T Consensus         1 M~~~~gKvavITGaas--GIG~a~A~~la~~Ga~Vvi~d~~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~l~~~~~   78 (275)
T PRK05876          1 MDGFPGRGAVITGGAS--GIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAF   78 (275)
T ss_pred             CCCCCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHH
T ss_conf             9598998799928266--99999999999879989999798899999999998269847999788899999999999999


Q ss_pred             HHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCC---CCCEEEEEEEEEECCCCCCCC
Q ss_conf             98379889993683317765557612579999977650166112322210022244---684168988752014564321
Q gi|254780462|r   81 ERWETLDFVVHSIAFSDKNELRGPYYNTSRDNFIQTMLVSCFSFTEIVRRAAQLMP---HGGAMITLTYGGSMRVVPNYN  157 (267)
Q Consensus        81 ~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~e~~~~~~~vn~~~~~~~~~~~~~~~~---~~G~II~isS~~~~~~~~~~~  157 (267)
T Consensus        79 ~~~G~iDilvnNAGi~~~----~~~~~~~~~~w~~~~~vNl~g~~~~~~~~lP~m~~~g~~G~IvntsS~agl~~~~~~~  154 (275)
T PRK05876         79 RLLGHVDVVFSNAGIVVG----GPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLG  154 (275)
T ss_pred             HHHCCCCEEECCCCCCCC----CCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCH
T ss_conf             984898851215744689----8723299999999876413899999999999999819994999968677538999974


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHCCCC--CHHHH--HHHHH--CCCC-CCCCCHHHHHHHHH
Q ss_conf             000001567763147799842108589756228726855750798--47999--99982--6889-98766999999999
Q gi|254780462|r  158 AMAPAKSALESSTKYLACDYGGMNIRINAISAGPVRTLAGASISN--GRDIA--AWSKE--NSPL-KRTVSLEDIGNSAL  230 (267)
Q Consensus       158 ~Y~asKaal~~ltr~lA~El~~~gIrVNaIaPG~i~T~~~~~~~~--~~~~~--~~~~~--~~Pl-~r~~~~edva~~v~  230 (267)
T Consensus       155 ~Y~asK~av~~lte~La~El~~~gI~V~~l~Pg~V~T~m~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~vA~~v~  234 (275)
T PRK05876        155 AYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTA  234 (275)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHH
T ss_conf             69999999999999999985112938999971889943466865236753454443345432011026999999999999


Q ss_pred             H
Q ss_conf             8
Q gi|254780462|r  231 Y  231 (267)
Q Consensus       231 f  231 (267)
T Consensus       235 ~  235 (275)
T PRK05876        235 D  235 (275)
T ss_pred             H
T ss_conf             9