HHsearch alignment for GI: 254780462 and conserved domain: PRK06841

Probab=100.00  E-value=0  Score=473.45  Aligned_cols=243  Identities=24%  Similarity=0.321  Sum_probs=222.3

Q ss_pred             CCC-CCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf             875-6887899938898852589999999989988999948978999999998515964999877999999999999999
Q gi|254780462|r    2 INI-LKGKRGLIMGVANDHSIAWGIAKVLHSAGAQLAFSYQGESIGKRLKPLALTVDSDFMIPCNVEDPSSMDLLFERIK   80 (267)
Q Consensus         2 m~~-L~gK~~lItGas~~~GIG~aia~~l~~~Ga~V~i~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   80 (267)
T Consensus         9 m~~~l~gKvalVTGas~--GIG~aiA~~la~~Ga~V~i~d~~~~~~~~~~~~--~~~~~~~~~~Dvt~~~~v~~~v~~~~   84 (255)
T PRK06841          9 LAFDLSGKVAVVTGGAS--GIGHAIAELFAAKGARVALLDRSEDVAEVAAQL--LGGNAKGLVCDVSDSQSVEAAVAAAI   84 (255)
T ss_pred             CCCCCCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH--CCCCEEEEEEECCCHHHHHHHHHHHH
T ss_conf             37589999999979677--899999999998799999996987899999984--59966999984699999999999999


Q ss_pred             HHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCC--CCEEEEEEEEEECCCCCCCCC
Q ss_conf             983798899936833177655576125799999776501661123222100222446--841689887520145643210
Q gi|254780462|r   81 ERWETLDFVVHSIAFSDKNELRGPYYNTSRDNFIQTMLVSCFSFTEIVRRAAQLMPH--GGAMITLTYGGSMRVVPNYNA  158 (267)
Q Consensus        81 ~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~e~~~~~~~vn~~~~~~~~~~~~~~~~~--~G~II~isS~~~~~~~~~~~~  158 (267)
T Consensus        85 ~~~g~iDiLVNNAGi~~----~~~~~~~~~e~w~~~~~vNl~g~f~~~~~~~~~m~~~~~G~IInisS~~~~~~~~~~~~  160 (255)
T PRK06841         85 SAFGRIDILVNSAGVAL----LAPAEDVSEADWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVA  160 (255)
T ss_pred             HHHCCCCEEEECCCCCC----CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHCCCCCCCHH
T ss_conf             98199879998997899----99804499999999999855999999999999999829965999946665668998588


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHC
Q ss_conf             00001567763147799842108589756228726855750798479999998268899876699999999986198878
Q gi|254780462|r  159 MAPAKSALESSTKYLACDYGGMNIRINAISAGPVRTLAGASISNGRDIAAWSKENSPLKRTVSLEDIGNSALYLLSYLSN  238 (267)
Q Consensus       159 Y~asKaal~~ltr~lA~El~~~gIrVNaIaPG~i~T~~~~~~~~~~~~~~~~~~~~Pl~r~~~~edva~~v~fL~Sd~s~  238 (267)
T Consensus       161 Y~asKaav~~ltrslA~ela~~gIrVNaVaPG~i~T~~~~~~~~~-~~~~~~~~~~Pl~R~g~pediA~~v~fLaSd~ss  239 (255)
T PRK06841        161 YCASKAGVVGMTKVLALEWGPHGITVNAISPTVVLTELGKKAWAG-EKGERAKKLIPAGRFAYPEEIAAAALFLASDAAA  239 (255)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCHHHHCCCC-HHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHC
T ss_conf             999999999999999999703095999985388977034332474-8899998559999977899999999999687323


Q ss_pred             CCCCCEEEECCCCCE
Q ss_conf             878868998688443
Q gi|254780462|r  239 GVTGEIHYVDCGYNI  253 (267)
Q Consensus       239 ~iTGq~l~VDGG~s~  253 (267)
T Consensus       240 ~iTG~~i~VDGG~ti  254 (255)
T PRK06841        240 MITGENLVIDGGYTI  254 (255)
T ss_pred             CCCCCEEEECCCCCC
T ss_conf             855870895868058