HHsearch alignment for GI: 254780462 and conserved domain: PRK08278

Probab=100.00  E-value=0  Score=428.28  Aligned_cols=237  Identities=16%  Similarity=0.166  Sum_probs=209.5

Q ss_pred             CCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCHHH--------HHHHHHHHHCCCCEEEEECCCCCHHHH
Q ss_conf             987568878999388988525899999999899889999489789--------999999985159649998779999999
Q gi|254780462|r    1 MINILKGKRGLIMGVANDHSIAWGIAKVLHSAGAQLAFSYQGESI--------GKRLKPLALTVDSDFMIPCNVEDPSSM   72 (267)
Q Consensus         1 mm~~L~gK~~lItGas~~~GIG~aia~~l~~~Ga~V~i~~~~~~~--------~~~~~~l~~~~~~~~~~~~Dv~~~~~v   72 (267)
T Consensus         1 Mm~-L~gKvalVTGas~--GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~l~~~~~~~a~e~~~~g~~~~~~~~Dv~~~~~v   77 (273)
T PRK08278          1 MMS-LSGKTLFITGASR--GIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAAEIEAAGGQALPLVGDVRDEDQV   77 (273)
T ss_pred             CCC-CCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHH
T ss_conf             989-8999899948765--9999999999987998999967722213345489999999997499089997117999999


Q ss_pred             HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCC--CCEEEEEEEEEEC
Q ss_conf             99999999983798899936833177655576125799999776501661123222100222446--8416898875201
Q gi|254780462|r   73 DLLFERIKERWETLDFVVHSIAFSDKNELRGPYYNTSRDNFIQTMLVSCFSFTEIVRRAAQLMPH--GGAMITLTYGGSM  150 (267)
Q Consensus        73 ~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~e~~~~~~~vn~~~~~~~~~~~~~~~~~--~G~II~isS~~~~  150 (267)
T Consensus        78 ~~~v~~~~~~~G~iDiLVNNAG~~~----~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IinisS~~~~  153 (273)
T PRK08278         78 AAAVAKTVERFGGIDICVNNASAIN----LTGTEDTPMKRFDLMQGINVRGTFLVSQACLPHLKKSANPHILTLSPPLNL  153 (273)
T ss_pred             HHHHHHHHHHHCCCCEEEECCCCCC----CCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHC
T ss_conf             9999999998599629998786666----750777518999999998355999999876567665799789998887874


Q ss_pred             CC--CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECC-CCCCCHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHH
Q ss_conf             45--6432100000156776314779984210858975622-87268557507984799999982688998766999999
Q gi|254780462|r  151 RV--VPNYNAMAPAKSALESSTKYLACDYGGMNIRINAISA-GPVRTLAGASISNGRDIAAWSKENSPLKRTVSLEDIGN  227 (267)
Q Consensus       151 ~~--~~~~~~Y~asKaal~~ltr~lA~El~~~gIrVNaIaP-G~i~T~~~~~~~~~~~~~~~~~~~~Pl~r~~~~edva~  227 (267)
T Consensus       154 ~~~~~~~~~aY~asKaal~~ltrslA~Ela~~gIrVNaVaP~~~~~t~~~~~~~---------~~~~~l~R~g~PediA~  224 (273)
T PRK08278        154 DPKWFAPHTAYTMAKYGMSLCTLGLAEEFREDGIAVNALWPRTMIATAAVQNLL---------GGDEAMRRSRTPEIMAD  224 (273)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHC---------CCCCHHHCCCCHHHHHH
T ss_conf             687778847999999999999999999960309899997279817689998410---------47212214678899999


Q ss_pred             HHHHHHCHHHCCCCCCEE-----EECCCCCE
Q ss_conf             999861988788788689-----98688443
Q gi|254780462|r  228 SALYLLSYLSNGVTGEIH-----YVDCGYNI  253 (267)
Q Consensus       228 ~v~fL~Sd~s~~iTGq~l-----~VDGG~s~  253 (267)
T Consensus       225 av~FL~Sd~as~iTGq~lV~~~~~~dgG~t~  255 (273)
T PRK08278        225 AAHAILTRPAREFTGNFLIDEEVLAEAGVTD  255 (273)
T ss_pred             HHHHHHCCHHHCCCCCEEEHHHHHHHCCCCC
T ss_conf             9999938753285486886235798689126