HHsearch alignment for GI: 254780462 and conserved domain: PRK09135

Probab=100.00  E-value=0  Score=444.82  Aligned_cols=242  Identities=24%  Similarity=0.294  Sum_probs=216.5

Q ss_pred             CCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECC-HHHHHH-HHHHHHC-CCCEEEEECCCCCHHHHHHHHHH
Q ss_conf             87568878999388988525899999999899889999489-789999-9999851-59649998779999999999999
Q gi|254780462|r    2 INILKGKRGLIMGVANDHSIAWGIAKVLHSAGAQLAFSYQG-ESIGKR-LKPLALT-VDSDFMIPCNVEDPSSMDLLFER   78 (267)
Q Consensus         2 m~~L~gK~~lItGas~~~GIG~aia~~l~~~Ga~V~i~~~~-~~~~~~-~~~l~~~-~~~~~~~~~Dv~~~~~v~~~~~~   78 (267)
T Consensus         2 M~-~sgKvalVTGas~--GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~   78 (249)
T PRK09135          2 MT-DSSKVALITGGAR--RIGAAIARTLHAAGYRVAVHYHRSAAEADALAAELNRLRPGSAAALQADLLDPDALEQLVAA   78 (249)
T ss_pred             CC-CCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHH
T ss_conf             78-9998899968875--89999999999879989998189879999999999850598189998169999999999999


Q ss_pred             HHHHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCC-CCEEEEEEEEEECCCCCCCC
Q ss_conf             99983798899936833177655576125799999776501661123222100222446-84168988752014564321
Q gi|254780462|r   79 IKERWETLDFVVHSIAFSDKNELRGPYYNTSRDNFIQTMLVSCFSFTEIVRRAAQLMPH-GGAMITLTYGGSMRVVPNYN  157 (267)
Q Consensus        79 ~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~e~~~~~~~vn~~~~~~~~~~~~~~~~~-~G~II~isS~~~~~~~~~~~  157 (267)
T Consensus        79 ~~~~~G~iDiLVNNAg~~~~----~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~~~~~  154 (249)
T PRK09135         79 AVAAFGRLDALVNNASSFYP----TPLGEITEAQWDDLFASNAKAPFFLSQAAAPQLRKQRGAIVNITDIHAERPLKNYP  154 (249)
T ss_pred             HHHHCCCCCEEEECCCCCCC----CCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCH
T ss_conf             99983999899989988999----98155999999999998339999999999999874788789998712277889856


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHH
Q ss_conf             00000156776314779984210858975622872685575079847999999826889987669999999998619887
Q gi|254780462|r  158 AMAPAKSALESSTKYLACDYGGMNIRINAISAGPVRTLAGASISNGRDIAAWSKENSPLKRTVSLEDIGNSALYLLSYLS  237 (267)
Q Consensus       158 ~Y~asKaal~~ltr~lA~El~~~gIrVNaIaPG~i~T~~~~~~~~~~~~~~~~~~~~Pl~r~~~~edva~~v~fL~Sd~s  237 (267)
T Consensus       155 ~Y~asKaal~~ltr~lA~ela~~-IrVNaVaPG~i~t~~~~~~~~-~~~~~~~~~~~Pl~R~g~pediA~~v~fLasd-a  231 (249)
T PRK09135        155 VYCAAKAALEMLTRSLALELAPE-VRVNAVAPGAILWPENDQGLD-AEARQAILARTPLKRIGTPEDIAEAVLFLLED-A  231 (249)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCCCCCCCCCCC-HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC-C
T ss_conf             78999999999999999997799-889999307736776334499-99999998579999981999999999999656-7


Q ss_pred             CCCCCCEEEECCCCCE
Q ss_conf             8878868998688443
Q gi|254780462|r  238 NGVTGEIHYVDCGYNI  253 (267)
Q Consensus       238 ~~iTGq~l~VDGG~s~  253 (267)
T Consensus       232 syiTGq~i~VDGG~sl  247 (249)
T PRK09135        232 SFITGQILAVDGGRSL  247 (249)
T ss_pred             CCCCCCEEEECCCCCC
T ss_conf             8742984885989457