HHsearch alignment for GI: 254780462 and conserved domain: TIGR01832

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase; InterPro: IPR011286 This entry describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (IPR002198 from INTERPRO). This protein has been characterised in Erwinia chrysanthemi as an enzyme of pectin degradation .; GO: 0008678 2-deoxy-D-gluconate 3-dehydrogenase activity, 0051287 NAD binding.
Probab=100.00  E-value=0  Score=399.90  Aligned_cols=242  Identities=23%  Similarity=0.267  Sum_probs=223.3

Q ss_pred             CCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHC
Q ss_conf             68878999388988525899999999899889999489789999999985159649998779999999999999999837
Q gi|254780462|r    5 LKGKRGLIMGVANDHSIAWGIAKVLHSAGAQLAFSYQGESIGKRLKPLALTVDSDFMIPCNVEDPSSMDLLFERIKERWE   84 (267)
Q Consensus         5 L~gK~~lItGas~~~GIG~aia~~l~~~Ga~V~i~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   84 (267)
T Consensus         3 L~GK~alvTGa~--tGlGQG~a~gLA~AGadi~g~~~~~~~~ET~~~v~~~Gr~f~~~~~Dl~~~~~~~~~~~~~~~~~g   80 (249)
T TIGR01832         3 LEGKVALVTGAN--TGLGQGIAVGLAEAGADIVGVGHISEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFG   80 (249)
T ss_pred             CCCCEEEEECCC--CCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCEEHHHHHHHCHHHHHHHHHHHHHHHC
T ss_conf             787768882598--873689999998577417851431263888999998252100021212232137899999998618


Q ss_pred             CCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCC-CCC--CEEEEEEEEEECCCCCCCCCCHH
Q ss_conf             988999368331776555761257999997765016611232221002224-468--41689887520145643210000
Q gi|254780462|r   85 TLDFVVHSIAFSDKNELRGPYYNTSRDNFIQTMLVSCFSFTEIVRRAAQLM-PHG--GAMITLTYGGSMRVVPNYNAMAP  161 (267)
Q Consensus        85 ~iD~lVnnAg~~~~~~~~~~~~~~~~e~~~~~~~vn~~~~~~~~~~~~~~~-~~~--G~II~isS~~~~~~~~~~~~Y~a  161 (267)
T Consensus        81 ~~DiLVNNAGIIrR----~da~~f~e~dWd~V~nvNlk~vF~l~q~~a~~~l~~G~~GkiiNIAS~LSFQGGirVPsYTA  156 (249)
T TIGR01832        81 KIDILVNNAGIIRR----EDAVEFSEKDWDDVMNVNLKSVFFLTQAAAKQFLKQGRGGKIINIASLLSFQGGIRVPSYTA  156 (249)
T ss_pred             CCCEEEECCCHHHH----HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHCCCCCCHHHHH
T ss_conf             86567607422104----57751561445799986689999999999999996489950575142344226755124666


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHCCCC
Q ss_conf             01567763147799842108589756228726855750798479999998268899876699999999986198878878
Q gi|254780462|r  162 AKSALESSTKYLACDYGGMNIRINAISAGPVRTLAGASISNGRDIAAWSKENSPLKRTVSLEDIGNSALYLLSYLSNGVT  241 (267)
Q Consensus       162 sKaal~~ltr~lA~El~~~gIrVNaIaPG~i~T~~~~~~~~~~~~~~~~~~~~Pl~r~~~~edva~~v~fL~Sd~s~~iT  241 (267)
T Consensus       157 SK~~v~GlTk~lAnEWa~~ginVNAIAPGY~~T~NT~~lRaD~~Rn~~Il~RIPaGrWG~p~D~~G~aVFLaS~ASdYv~  236 (249)
T TIGR01832       157 SKHGVAGLTKLLANEWAAKGINVNAIAPGYMETNNTQALRADEDRNAAILERIPAGRWGTPEDLGGAAVFLASSASDYVN  236 (249)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
T ss_conf             67777778999998998738815311588766455154203177789997317899984840003068888775543436


Q ss_pred             CCEEEECCCCC
Q ss_conf             86899868844
Q gi|254780462|r  242 GEIHYVDCGYN  252 (267)
Q Consensus       242 Gq~l~VDGG~s  252 (267)
T Consensus       237 G~~l~VDGGWL  247 (249)
T TIGR01832       237 GAILAVDGGWL  247 (249)
T ss_pred             CEEEEECCCCC
T ss_conf             50662077313