HHsearch alignment for GI: 254780462 and conserved domain: TIGR02622
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase; InterPro: IPR013445 This entry contains CDP-glucose 4,6-dehydratases from a variety of Gram-negative and Gram-positive bacteria. Members are typically encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate CDP-D-glucose. This is used by the proteins in this entry to produce CDP-4-keto-6-deoxyglucose..
Probab=99.04 E-value=2e-09 Score=77.17 Aligned_cols=171 Identities=17% Similarity=0.179 Sum_probs=127.6
Q ss_pred CCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECC----HHHHHHHHHHHHCCCCE---EEEECCCCCHHHHHHHHH
Q ss_conf 68878999388988525899999999899889999489----78999999998515964---999877999999999999
Q gi|254780462|r 5 LKGKRGLIMGVANDHSIAWGIAKVLHSAGAQLAFSYQG----ESIGKRLKPLALTVDSD---FMIPCNVEDPSSMDLLFE 77 (267)
Q Consensus 5 L~gK~~lItGas~~~GIG~aia~~l~~~Ga~V~i~~~~----~~~~~~~~~l~~~~~~~---~~~~~Dv~~~~~v~~~~~ 77 (267)
T Consensus 2 w~gKkVl~TGHTGFK--GSWL~lWL~~lGA~V~GYSL~P~t~PnlFe~-l~l~~~~~~~Wyf~~~~gDIrD~~~L~~~~~ 78 (361)
T TIGR02622 2 WQGKKVLITGHTGFK--GSWLSLWLLELGAEVAGYSLDPPTSPNLFEL-LNLAKKIKDSWYFSSIFGDIRDAAKLEKAIA 78 (361)
T ss_pred CCCCEEEEECCCCCC--HHHHHHHHHHCCCEEEEEECCCCCCCCHHHH-HHHHHHHHCCEEEEEEEECCCCHHHHHHHHH
T ss_conf 568678984578642--5589999984796798971688788405557-5254243235055423303232789999999
Q ss_pred HHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEEEEEECC------
Q ss_conf 99998379889993683317765557612579999977650166112322210022244684168988752014------
Q gi|254780462|r 78 RIKERWETLDFVVHSIAFSDKNELRGPYYNTSRDNFIQTMLVSCFSFTEIVRRAAQLMPHGGAMITLTYGGSMR------ 151 (267)
Q Consensus 78 ~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~e~~~~~~~vn~~~~~~~~~~~~~~~~~~G~II~isS~~~~~------ 151 (267)
T Consensus 79 ~~-----~PeIvFHlAA--------QPLVr~SY~~P~~Tf~TNVmGT~~lLea-~r~~~~~~a~v~vTsDK~Y~N~EW~w 144 (361)
T TIGR02622 79 EF-----KPEIVFHLAA--------QPLVRKSYADPLETFETNVMGTVNLLEA-IRAIKSVKAVVLVTSDKVYENKEWVW 144 (361)
T ss_pred HC-----CCCEEEHHHH--------HHHHHHHHHCHHHHEEEHHHHHHHHHHH-HHHCCCCEEEEEEECCEEECCCCCCC
T ss_conf 72-----8989833354--------2788986732020222003222577889-97469956999861672330787887
Q ss_pred ------CCCCCCCCHHHHHHHHHHHHHHHHHHHH-------HCCEEEEECCCCC
Q ss_conf ------5643210000015677631477998421-------0858975622872
Q gi|254780462|r 152 ------VVPNYNAMAPAKSALESSTKYLACDYGG-------MNIRINAISAGPV 192 (267)
Q Consensus 152 ------~~~~~~~Y~asKaal~~ltr~lA~El~~-------~gIrVNaIaPG~i 192 (267)
T Consensus 145 gYRE~D~LGGhDPYS~SKAcAELv~~syR~SF~~~~~f~~~h~~~iAsaRAGNV 198 (361)
T TIGR02622 145 GYRETDPLGGHDPYSSSKACAELVIASYRSSFFGEANFQSTHGIKIASARAGNV 198 (361)
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCC
T ss_conf 523247887716775328999999999986068888755468636899860640