HHsearch alignment for GI: 254780462 and conserved domain: TIGR02632
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; InterPro: IPR013454 Rhamnose is a methyl-pentose sugar which is found as a constituent of pectin within the cell walls of dicotyledonous plants and has also been found in the mucilage of a number of legume plants . RhaD from Rhizobium leguminosarum bv. trifolii is encoded by a gene occurring in a rhamnose utilisation cluster, and is necessary for growth on this compound . This protein is predicted to be a bifunctional NAD-dependent aldolase/dehydrogenase..
Probab=100.00 E-value=0 Score=337.24 Aligned_cols=244 Identities=20% Similarity=0.286 Sum_probs=215.4
Q ss_pred CCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHHHCCC--CEEE------------EECCCCC
Q ss_conf 568878999388988525899999999899889999489789999-999985159--6499------------9877999
Q gi|254780462|r 4 ILKGKRGLIMGVANDHSIAWGIAKVLHSAGAQLAFSYQGESIGKR-LKPLALTVD--SDFM------------IPCNVED 68 (267)
Q Consensus 4 ~L~gK~~lItGas~~~GIG~aia~~l~~~Ga~V~i~~~~~~~~~~-~~~l~~~~~--~~~~------------~~~Dv~~ 68 (267)
T Consensus 421 ~LA~~Va~VtGGas--GIG~~~A~rL~~eGAhvV~aD~d~~~a~~va~~~~~~fG~d~a~AGsdisaCGPaiGl~~DvT~ 498 (709)
T TIGR02632 421 ELARRVAFVTGGAS--GIGRETARRLVDEGAHVVLADLDAEAAEAVAAEIVDKFGADKAVAGSDISACGPAIGLKLDVTD 498 (709)
T ss_pred CCCCEEEEEECCCC--CHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEECCCCHHCCCCCEEEEEEECC
T ss_conf 71570688973886--5268999999736977999623657899999998631388812114320004671002763175
Q ss_pred HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCC-HHHHHHHHHCCCCHHHHHHHHCCCCCCCC---CEEEEE
Q ss_conf 99999999999998379889993683317765557612579-99997765016611232221002224468---416898
Q gi|254780462|r 69 PSSMDLLFERIKERWETLDFVVHSIAFSDKNELRGPYYNTS-RDNFIQTMLVSCFSFTEIVRRAAQLMPHG---GAMITL 144 (267)
Q Consensus 69 ~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~-~e~~~~~~~vn~~~~~~~~~~~~~~~~~~---G~II~i 144 (267)
T Consensus 499 e~~v~~~f~~v~~~yGGvD~vv~nAGi~~S----~p~~~t~r~~~W~l~~di~atG~FLVareA~r~~~~Q~lGG~~Vfi 574 (709)
T TIGR02632 499 EEAVKAAFAEVALAYGGVDIVVNNAGIAVS----SPLEETERLEEWDLNLDILATGYFLVAREAARLMRKQGLGGNIVFI 574 (709)
T ss_pred HHHHHHHHHHHHHHHCCEEEEEECCCHHCC----CCCHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHCCCCCCEEEE
T ss_conf 899999999999974984787652530105----7702322155432012010120035888999999731798556776
Q ss_pred EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCC-C-CHH-----------HHCCC---C------
Q ss_conf 875201456432100000156776314779984210858975622872-6-855-----------75079---8------
Q gi|254780462|r 145 TYGGSMRVVPNYNAMAPAKSALESSTKYLACDYGGMNIRINAISAGPV-R-TLA-----------GASIS---N------ 202 (267)
Q Consensus 145 sS~~~~~~~~~~~~Y~asKaal~~ltr~lA~El~~~gIrVNaIaPG~i-~-T~~-----------~~~~~---~------ 202 (267)
T Consensus 575 aSkNav~A~kn~~AY~aaKA~~~Hl~R~LA~Ela~~GiRVNtV~PdaVl~GS~if~~~W~~~raA~ygi~ftadePtdvl 654 (709)
T TIGR02632 575 ASKNAVVAGKNASAYSAAKAAEAHLARCLAAELAELGIRVNTVNPDAVLRGSGIFDGEWREERAAAYGIPFTADEPTDVL 654 (709)
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHH
T ss_conf 11000111788405558999999899999981478864640106500110552153367888887707743468723578
Q ss_pred CHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHCCCCCCEEEECCCCCE
Q ss_conf 479999998268899876699999999986198878878868998688443
Q gi|254780462|r 203 GRDIAAWSKENSPLKRTVSLEDIGNSALYLLSYLSNGVTGEIHYVDCGYNI 253 (267)
Q Consensus 203 ~~~~~~~~~~~~Pl~r~~~~edva~~v~fL~Sd~s~~iTGq~l~VDGG~s~ 253 (267)
T Consensus 655 ~d~L~~fY~~RslLk~~v~p~d~AeAvf~L~S~~~~~tTG~~i~VDaG~~~ 705 (709)
T TIGR02632 655 ADKLEEFYAKRSLLKREVLPADIAEAVFFLASDKLEKTTGLIITVDAGVAA 705 (709)
T ss_pred HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCEECCCCCCCC
T ss_conf 888988987543237766808899999997345101027866403777522