HHsearch alignment for GI: 254780462 and conserved domain: TIGR03201
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=95.83 E-value=0.15 Score=29.23 Aligned_cols=107 Identities=13% Similarity=0.182 Sum_probs=62.8
Q ss_pred CCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 56887899938898852589999999989988999948978999999998515964999877999999999999999983
Q gi|254780462|r 4 ILKGKRGLIMGVANDHSIAWGIAKVLHSAGAQLAFSYQGESIGKRLKPLALTVDSDFMIPCNVEDPSSMDLLFERIKERW 83 (267)
Q Consensus 4 ~L~gK~~lItGas~~~GIG~aia~~l~~~Ga~V~i~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 83 (267)
T Consensus 164 v~~g~~V~V~G~-G--~iGl~a~~~ak~~Ga~Vi~vd~~~~rle~----a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~~~ 236 (349)
T TIGR03201 164 LKKGDLVIVIGA-G--GVGGYMVQTAKAMGAAVVAIDIDPEKLEM----MKGFGADLTLNPKDKSAREVKKLIKAFAKAR 236 (349)
T ss_pred CCCCCEEEEECC-C--HHHHHHHHHHHHCCCEEEEEECCHHHHHH----HHHCCCCEEECCCCCCHHHHHHHHHHHCCCC
T ss_conf 899988999897-4--89999999999859979999499999999----9964998998787677899999997541456
Q ss_pred CCCC----EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEEEE
Q ss_conf 7988----999368331776555761257999997765016611232221002224468416898875
Q gi|254780462|r 84 ETLD----FVVHSIAFSDKNELRGPYYNTSRDNFIQTMLVSCFSFTEIVRRAAQLMPHGGAMITLTYG 147 (267)
Q Consensus 84 g~iD----~lVnnAg~~~~~~~~~~~~~~~~e~~~~~~~vn~~~~~~~~~~~~~~~~~~G~II~isS~ 147 (267)
T Consensus 237 G-~~~~~~~v~e~~G-----------------------------~~~~~~~a~~~~~~gG~iv~vG~~ 274 (349)
T TIGR03201 237 G-LRSTGWKIFECSG-----------------------------SKPGQESALSLLSHGGTLVVVGYT 274 (349)
T ss_pred C-CCCCCCEEEEECC-----------------------------CHHHHHHHHHHCCCCCEEEEECCC
T ss_conf 7-5655636998248-----------------------------889999999973589799997505