HHsearch alignment for GI: 254780462 and conserved domain: TIGR03206
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=100.00 E-value=0 Score=464.51 Aligned_cols=243 Identities=17% Similarity=0.230 Sum_probs=224.4
Q ss_pred CCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 6887899938898852589999999989988999948978999-999998515964999877999999999999999983
Q gi|254780462|r 5 LKGKRGLIMGVANDHSIAWGIAKVLHSAGAQLAFSYQGESIGK-RLKPLALTVDSDFMIPCNVEDPSSMDLLFERIKERW 83 (267)
Q Consensus 5 L~gK~~lItGas~~~GIG~aia~~l~~~Ga~V~i~~~~~~~~~-~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 83 (267)
T Consensus 1 L~gKvalITG~s~--GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~g~~~~~~~~Dv~d~~~v~~~v~~~~~~~ 78 (250)
T TIGR03206 1 LKDKTAIVTGGGG--GIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQAL 78 (250)
T ss_pred CCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHC
T ss_conf 9519999968576--89999999999879999999798899999999999539928999944899999999999999975
Q ss_pred CCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCC--CCCEEEEEEEEEECCCCCCCCCCHH
Q ss_conf 79889993683317765557612579999977650166112322210022244--6841689887520145643210000
Q gi|254780462|r 84 ETLDFVVHSIAFSDKNELRGPYYNTSRDNFIQTMLVSCFSFTEIVRRAAQLMP--HGGAMITLTYGGSMRVVPNYNAMAP 161 (267)
Q Consensus 84 g~iD~lVnnAg~~~~~~~~~~~~~~~~e~~~~~~~vn~~~~~~~~~~~~~~~~--~~G~II~isS~~~~~~~~~~~~Y~a 161 (267)
T Consensus 79 G~iDilvnnAg~~~----~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~~~~~~~~~~~Y~a 154 (250)
T TIGR03206 79 GPVDVLVNNAGWDK----FGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAA 154 (250)
T ss_pred CCCCEEEECCCCCC----CCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCHHHHH
T ss_conf 99979998988899----98903499999999999982999999999999999749917999655775768998588999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHCC----CCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHH
Q ss_conf 015677631477998421085897562287268557507----9847999999826889987669999999998619887
Q gi|254780462|r 162 AKSALESSTKYLACDYGGMNIRINAISAGPVRTLAGASI----SNGRDIAAWSKENSPLKRTVSLEDIGNSALYLLSYLS 237 (267)
Q Consensus 162 sKaal~~ltr~lA~El~~~gIrVNaIaPG~i~T~~~~~~----~~~~~~~~~~~~~~Pl~r~~~~edva~~v~fL~Sd~s 237 (267)
T Consensus 155 sKaav~~ltk~lA~ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~e~~~~~~~~~~Pl~R~g~pediA~~v~fL~Sd~s 234 (250)
T TIGR03206 155 CKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFSSDDA 234 (250)
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHH
T ss_conf 99999999999999965329189999768888677898764438869999999847998998399999999999958343
Q ss_pred CCCCCCEEEECCCCCE
Q ss_conf 8878868998688443
Q gi|254780462|r 238 NGVTGEIHYVDCGYNI 253 (267)
Q Consensus 238 ~~iTGq~l~VDGG~s~ 253 (267)
T Consensus 235 ~~itG~~i~VDGG~t~ 250 (250)
T TIGR03206 235 SFITGQVLSVSGGLTM 250 (250)
T ss_pred CCCCCCEEEECCCEEC
T ss_conf 3845883886869049