HHsearch alignment for GI: 254780462 and conserved domain: TIGR03325
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=100.00 E-value=0 Score=420.93 Aligned_cols=248 Identities=16% Similarity=0.165 Sum_probs=209.5
Q ss_pred CCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 56887899938898852589999999989988999948978999999998515964999877999999999999999983
Q gi|254780462|r 4 ILKGKRGLIMGVANDHSIAWGIAKVLHSAGAQLAFSYQGESIGKRLKPLALTVDSDFMIPCNVEDPSSMDLLFERIKERW 83 (267)
Q Consensus 4 ~L~gK~~lItGas~~~GIG~aia~~l~~~Ga~V~i~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 83 (267)
T Consensus 2 ~L~gKvalITGgs~--GIG~aia~~~a~~Ga~V~i~~r~~~~l~~~~--~~~g~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 77 (262)
T TIGR03325 2 RLKGEVVLVTGGAS--GLGRAIVDRFVAEGARVAVLDKSAAGLQELE--AAHGDAVVGVEGDVRSLDDHKEAVARCVAAF 77 (262)
T ss_pred CCCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHH--HHCCCCEEEEECCCCCHHHHHHHHHHHHHHH
T ss_conf 98998899906787--8999999999987999999989989999999--8679967999845799999999999999984
Q ss_pred CCCCEEEECCCCCCCC-CCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCC-CCEEEEEEEEEECCCCCCCCCCHH
Q ss_conf 7988999368331776-55576125799999776501661123222100222446-841689887520145643210000
Q gi|254780462|r 84 ETLDFVVHSIAFSDKN-ELRGPYYNTSRDNFIQTMLVSCFSFTEIVRRAAQLMPH-GGAMITLTYGGSMRVVPNYNAMAP 161 (267)
Q Consensus 84 g~iD~lVnnAg~~~~~-~~~~~~~~~~~e~~~~~~~vn~~~~~~~~~~~~~~~~~-~G~II~isS~~~~~~~~~~~~Y~a 161 (267)
T Consensus 78 G~iDiLVnNAG~~~~~~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~~~~~~Y~a 157 (262)
T TIGR03325 78 GKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPNGGGPLYTA 157 (262)
T ss_pred CCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHH
T ss_conf 99888997265168776434586241499999999997499999999999999970981899987103248899668999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHC--------CCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 01567763147799842108589756228726855750--------7984799999982688998766999999999861
Q gi|254780462|r 162 AKSALESSTKYLACDYGGMNIRINAISAGPVRTLAGAS--------ISNGRDIAAWSKENSPLKRTVSLEDIGNSALYLL 233 (267)
Q Consensus 162 sKaal~~ltr~lA~El~~~gIrVNaIaPG~i~T~~~~~--------~~~~~~~~~~~~~~~Pl~r~~~~edva~~v~fL~ 233 (267)
T Consensus 158 sKaal~~ltr~lA~e~~~~-IRVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeia~av~fL~ 236 (262)
T TIGR03325 158 AKHAVVGLVKELAFELAPY-VRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYTGAYVFFA 236 (262)
T ss_pred HHHHHHHHHHHHHHHHCCC-CEEEEEEECCCCCCCCCCCCCCHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHC
T ss_conf 9999999999999997599-789999537888798675443135554211058999970799899839999999999981
Q ss_pred CH-HHCCCCCCEEEECCCCCEEEC
Q ss_conf 98-878878868998688443343
Q gi|254780462|r 234 SY-LSNGVTGEIHYVDCGYNIVAM 256 (267)
Q Consensus 234 Sd-~s~~iTGq~l~VDGG~s~~~~ 256 (267)
T Consensus 237 s~~~s~~iTG~~l~VDGG~~~~~~ 260 (262)
T TIGR03325 237 TRGDTVPATGAVLNYDGGMGVRGF 260 (262)
T ss_pred CCCHHCCEECCEEEECCCCCCCEE
T ss_conf 980226945868897947106730