HHsearch alignment for GI: 254780462 and conserved domain: TIGR03451
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=96.79 E-value=0.029 Score=33.57 Aligned_cols=167 Identities=13% Similarity=0.110 Sum_probs=87.9
Q ss_pred CCCCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 5688789993889885258999999998998-899994897899999999851596499987799999999999999998
Q gi|254780462|r 4 ILKGKRGLIMGVANDHSIAWGIAKVLHSAGA-QLAFSYQGESIGKRLKPLALTVDSDFMIPCNVEDPSSMDLLFERIKER 82 (267)
Q Consensus 4 ~L~gK~~lItGas~~~GIG~aia~~l~~~Ga-~V~i~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 82 (267)
T Consensus 174 ~~~g~~VlV~GaG---~iGl~a~~~ak~~Ga~~Vi~~d~~~~rl~~A----~~lGa~~~i--~~~~~~~----~~~v~~~ 240 (358)
T TIGR03451 174 VKRGDSVAVIGCG---GVGDAAIAGAALAGASKIIAVDIDDRKLEWA----REFGATHTV--NSSGTDP----VEAIRAL 240 (358)
T ss_pred CCCCCEEEEECCC---HHHHHHHHHHHHCCCCEEEEEECCHHHHHHH----HHCCCEEEE--CCCCCCH----HHHHHHH
T ss_conf 9999889996737---6999999999983991899991988999999----965990997--3998788----9999998
Q ss_pred HC--CCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCCCCCH
Q ss_conf 37--9889993683317765557612579999977650166112322210022244684168988752014564321000
Q gi|254780462|r 83 WE--TLDFVVHSIAFSDKNELRGPYYNTSRDNFIQTMLVSCFSFTEIVRRAAQLMPHGGAMITLTYGGSMRVVPNYNAMA 160 (267)
Q Consensus 83 ~g--~iD~lVnnAg~~~~~~~~~~~~~~~~e~~~~~~~vn~~~~~~~~~~~~~~~~~~G~II~isS~~~~~~~~~~~~Y~ 160 (267)
T Consensus 241 t~g~G~Dvvie~~G~~--------------~~~---------------~~al~~~~~gG~iv~~G~~~~~~~~~------ 285 (358)
T TIGR03451 241 TGGFGADVVIDAVGRP--------------ETY---------------KQAFYARDLAGTVVLVGVPTPDMTLE------ 285 (358)
T ss_pred HCCCCCCEEEECCCCH--------------HHH---------------HHHHHHHCCCCEEEEEECCCCCCCCC------
T ss_conf 5898874999999998--------------999---------------99999762796999992258997322------
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHCCCCCHHHHHHHHH-CCCCCCCCC----HHHHHHHHHHHHC
Q ss_conf 0015677631477998421085897562287268557507984799999982-688998766----9999999998619
Q gi|254780462|r 161 PAKSALESSTKYLACDYGGMNIRINAISAGPVRTLAGASISNGRDIAAWSKE-NSPLKRTVS----LEDIGNSALYLLS 234 (267)
Q Consensus 161 asKaal~~ltr~lA~El~~~gIrVNaIaPG~i~T~~~~~~~~~~~~~~~~~~-~~Pl~r~~~----~edva~~v~fL~S 234 (267)
T Consensus 286 -----~-~-----~~~~~~~~~~i~~s~~~~~~-~--~--~~~~~~~~li~~g~i~~~~lIt~~~~Le~~~eAfe~~~~ 348 (358)
T TIGR03451 286 -----L-P-----LLDVFGRGGALKSSWYGDCL-P--E--RDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHA 348 (358)
T ss_pred -----C-C-----HHHHHHCCCEEEEEEECCCC-H--H--HHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHC
T ss_conf -----2-6-----99997377589998864876-0--8--899999999984979984138999879999999999877