HHsearch alignment for GI: 254780462 and conserved domain: TIGR03589

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=99.69  E-value=3.1e-15  Score=112.63  Aligned_cols=214  Identities=16%  Similarity=0.142  Sum_probs=147.7

Q ss_pred             CCCCCEEEEECCCCCCCHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf             568878999388988525899999999899--889999489789999999985159649998779999999999999999
Q gi|254780462|r    4 ILKGKRGLIMGVANDHSIAWGIAKVLHSAG--AQLAFSYQGESIGKRLKPLALTVDSDFMIPCNVEDPSSMDLLFERIKE   81 (267)
Q Consensus         4 ~L~gK~~lItGas~~~GIG~aia~~l~~~G--a~V~i~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (267)
T Consensus         1 ~~~~K~ILVTGGaGf--IGS~lv~~Ll~~~~~~~iii~~~de~~~~~l~~~~-~~~~i~f~~gDIrD~~~l~~~~~----   73 (324)
T TIGR03589         1 MFNNKSILITGGTGS--FGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKF-PAPCLRFFIGDVRDKERLTRALR----   73 (324)
T ss_pred             CCCCCEEEEECCCCH--HHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHC-CCCCEEEEECCCCCHHHHHHHHC----
T ss_conf             999399999079779--99999999997299828999668640328898516-89875999677778899997634----


Q ss_pred             HHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCCCCCHH
Q ss_conf             83798899936833177655576125799999776501661123222100222446841689887520145643210000
Q gi|254780462|r   82 RWETLDFVVHSIAFSDKNELRGPYYNTSRDNFIQTMLVSCFSFTEIVRRAAQLMPHGGAMITLTYGGSMRVVPNYNAMAP  161 (267)
Q Consensus        82 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~~e~~~~~~~vn~~~~~~~~~~~~~~~~~~G~II~isS~~~~~~~~~~~~Y~a  161 (267)
T Consensus        74 ---~vD~VfHaAA~khV-----p---~se~nP~e~i~tNV~Gt~nlleaa~~~~V--kk~V~iSTDka~~P~---n~yGa  137 (324)
T TIGR03589        74 ---GVDYVVHAAALKQV-----P---AAEYNPFECIRTNINGAQNVIDAAIDNGV--KRVVALSTDKAANPI---NLYGA  137 (324)
T ss_pred             ---CCCEEEECCCCCCC-----C---HHHHCHHHHHHHHHHHHHHHHHHHHHCCC--CEEEEECCCCCCCCC---CCCCC
T ss_conf             ---88899994627767-----2---67769899999997999999999885554--317862268888996---74312


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHCCCCCHHHHHHHHHC-CCC--------CCCCCHHHHHHHHHHH
Q ss_conf             0156776314779984210858975622872685575079847999999826-889--------9876699999999986
Q gi|254780462|r  162 AKSALESSTKYLACDYGGMNIRINAISAGPVRTLAGASISNGRDIAAWSKEN-SPL--------KRTVSLEDIGNSALYL  232 (267)
Q Consensus       162 sKaal~~ltr~lA~El~~~gIrVNaIaPG~i~T~~~~~~~~~~~~~~~~~~~-~Pl--------~r~~~~edva~~v~fL  232 (267)
T Consensus       138 sK~~~E~l~~~~~~~~~~~~~~~~~vRygNV~gsrgSVi---P~F~~qi~~g~~~~~itd~~mtRf~mtv~dav~lV~~a  214 (324)
T TIGR03589       138 TKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRGSVV---PFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKS  214 (324)
T ss_pred             CHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCH---HHHHHHHHCCCCCCCCCCCCEEEEEEEHHHHHHHHHHH
T ss_conf             367679999999985078886378863327518886639---99999998399974449998079988899999999999


Q ss_pred             HCHHHCCCCCCEEE
Q ss_conf             19887887886899
Q gi|254780462|r  233 LSYLSNGVTGEIHY  246 (267)
Q Consensus       233 ~Sd~s~~iTGq~l~  246 (267)
T Consensus       215 ~~---~~~~GEifv  225 (324)
T TIGR03589       215 LE---RMLGGEIFV  225 (324)
T ss_pred             HH---HCCCCEEEE
T ss_conf             98---288984998