HHsearch alignment for GI: 254780462 and conserved domain: cd01078
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=98.64 E-value=3.6e-07 Score=63.45 Aligned_cols=83 Identities=16% Similarity=0.202 Sum_probs=61.0
Q ss_pred CCCC-CCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHHHCCCCEEEEECCCCCHHHHHHHHHH
Q ss_conf 9875-68878999388988525899999999899889999489789999-999985159649998779999999999999
Q gi|254780462|r 1 MINI-LKGKRGLIMGVANDHSIAWGIAKVLHSAGAQLAFSYQGESIGKR-LKPLALTVDSDFMIPCNVEDPSSMDLLFER 78 (267)
Q Consensus 1 mm~~-L~gK~~lItGas~~~GIG~aia~~l~~~Ga~V~i~~~~~~~~~~-~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~ 78 (267)
T Consensus 21 ~~g~dl~g~~~~V~G~tG--~vG~~~A~~lA~~Ga~v~lv~R~~ek~~~~a~~i~~r~g~-~~~~~~~~~~~~~~~~l-- 95 (194)
T cd01078 21 LMGKDLKGKTAVVLGGTG--PVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGE-GVGAVETSDDAARAAAI-- 95 (194)
T ss_pred HHCCCCCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCC-CCCCCCCCCHHHHHHHH--
T ss_conf 829986798899985885--7899999999983997999958788899999999997098-73113578877899774--
Q ss_pred HHHHHCCCCEEEECC
Q ss_conf 999837988999368
Q gi|254780462|r 79 IKERWETLDFVVHSI 93 (267)
Q Consensus 79 ~~~~~g~iD~lVnnA 93 (267)
T Consensus 96 -----~~adiV~~a~ 105 (194)
T cd01078 96 -----KGADVVFAAG 105 (194)
T ss_pred -----CCCCEEEECC
T ss_conf -----6698999642