HHsearch alignment for GI: 254780462 and conserved domain: cd01968
>cd01968 Nitrogenase_NifE_I Nitrogenase_NifE_I: a subgroup of the NifE subunit of the NifEN complex: NifE forms an alpha2beta2 tetramer with NifN. NifE and NifN are structurally homologous to nitrogenase MoFe protein alpha and beta subunits respectively. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of the MoFe protein. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to the NifEN complex where it is further processed to FeMoco. The NifEN bound precursor of FeMoco has been identified as a molybdenum-free, iron- and sulfur- containing analog of FeMoco. It has been suggested that this NifEN bound precursor also acts as a cofactor precursor in nitrogenase systems which require a cofactor other than FeMoco: i.e. iron-vanadium cofactor (FeVco) or iron only cofactor (FeFeco).
Probab=93.50 E-value=0.59 Score=25.58 Aligned_cols=55 Identities=15% Similarity=0.144 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHCCCCEEEEECC--CC--CHHHHHHHHHHHHHHHCCCCEEEECCCCCC
Q ss_conf 78999999998515964999877--99--999999999999998379889993683317
Q gi|254780462|r 43 ESIGKRLKPLALTVDSDFMIPCN--VE--DPSSMDLLFERIKERWETLDFVVHSIAFSD 97 (267)
Q Consensus 43 ~~~~~~~~~l~~~~~~~~~~~~D--v~--~~~~v~~~~~~~~~~~g~iD~lVnnAg~~~ 97 (267)
T Consensus 72 ~~L~~~I~~~~~~~~P~~I~v~tTC~~e~IGDDi~~v~~~~~~~~~~pvv~v~tpgf~G 130 (410)
T cd01968 72 KKLYKAILEIIERYHPKAVFVYSTCVVALIGDDIDAVCKTASEKFGIPVIPVHSPGFVG 130 (410)
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCHHHHHHHHHHHHCCCEEEEECCCCCC
T ss_conf 99999999999854998899975670887356399999998886199779832899787