HHsearch alignment for GI: 254780462 and conserved domain: pfam02254

>pfam02254 TrkA_N TrkA-N domain. This domain is found in a wide variety of proteins. These protein include potassium channels, phosphoesterases, and various other transporters. This domain binds to NAD.

Probab=95.47  E-value=0.066  Score=31.38  Aligned_cols=68  Identities=16%  Similarity=0.135  Sum_probs=47.8

Q ss_pred             EEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEE
Q ss_conf             99938898852589999999989988999948978999999998515964999877999999999999999983798899
Q gi|254780462|r   10 GLIMGVANDHSIAWGIAKVLHSAGAQLAFSYQGESIGKRLKPLALTVDSDFMIPCNVEDPSSMDLLFERIKERWETLDFV   89 (267)
Q Consensus        10 ~lItGas~~~GIG~aia~~l~~~Ga~V~i~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   89 (267)
T Consensus         1 viI~G~-g~--~G~~la~~L~~~~-~v~vId~d~~~~~~---~~~~~--~~vi~GD~~~~~~L~~a~------i~~a~~v   65 (115)
T pfam02254         1 IIIIGY-GR--VGRSLAEELREGG-PVVVIDKDPERVEE---LREEG--VPVVVGDATDEEVLEEAG------IEDADAV   65 (115)
T ss_pred             CEEECC-CH--HHHHHHHHHHHCC-CEEEEECCHHHHHH---HHHCC--CEEEEEECCCHHHHHHHC------CCCCCEE
T ss_conf             999878-88--9999999998089-99999998799877---88669--869999568866787619------2028799


Q ss_pred             EEC
Q ss_conf             936
Q gi|254780462|r   90 VHS   92 (267)
Q Consensus        90 Vnn   92 (267)
T Consensus        66 i~~   68 (115)
T pfam02254        66 VAA   68 (115)
T ss_pred             EEE
T ss_conf             996