HHsearch alignment for GI: 254780462 and conserved domain: pfam02719
>pfam02719 Polysacc_synt_2 Polysaccharide biosynthesis protein. This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein mannosyl-transferase and several putative epimerases (e.g. WbiI).
Probab=99.72 E-value=1.1e-15 Score=115.37 Aligned_cols=218 Identities=16% Similarity=0.144 Sum_probs=155.6
Q ss_pred EEEECCCCCCCHHHHHHHHHHHCCCE-EEEEECCHHHHHH-HHHHHH--CCCCEEEEECCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 99938898852589999999989988-9999489789999-999985--1596499987799999999999999998379
Q gi|254780462|r 10 GLIMGVANDHSIAWGIAKVLHSAGAQ-LAFSYQGESIGKR-LKPLAL--TVDSDFMIPCNVEDPSSMDLLFERIKERWET 85 (267)
Q Consensus 10 ~lItGas~~~GIG~aia~~l~~~Ga~-V~i~~~~~~~~~~-~~~l~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 85 (267)
T Consensus 1 ILVTGGaGF--IGS~Lv~~Ll~~g~~~v~v~d~~~~~~~~~~~~l~~~~~~~~~~~~~~DI~D~~~l~~~~~~~-----~ 73 (280)
T pfam02719 1 VLVTGGGGS--IGSELCRQILKFNPKKIILFSRDEFKLYEIEQELREEYNDPKLRFFIGDVRDRERLERAMEEY-----G 73 (280)
T ss_pred EEEECCCCH--HHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHC-----C
T ss_conf 799748867--999999999968998899990887427789999886267898389981168989999998754-----9
Q ss_pred CCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHH
Q ss_conf 88999368331776555761257999997765016611232221002224468416898875201456432100000156
Q gi|254780462|r 86 LDFVVHSIAFSDKNELRGPYYNTSRDNFIQTMLVSCFSFTEIVRRAAQLMPHGGAMITLTYGGSMRVVPNYNAMAPAKSA 165 (267)
Q Consensus 86 iD~lVnnAg~~~~~~~~~~~~~~~~e~~~~~~~vn~~~~~~~~~~~~~~~~~~G~II~isS~~~~~~~~~~~~Y~asKaa 165 (267)
T Consensus 74 ~D~V~HlAA~~~V--------~~s~~~P~~~~~~Nv~gT~nlLe~a~~~~v--k~~v~~STd~a~~P---~s~Yg~sK~~ 140 (280)
T pfam02719 74 VDTVFHAAALKHV--------PLVEYNPMEAIKTNVLGTENVAEAAIENGV--EKFVLISTDKAVNP---TNVMGATKRL 140 (280)
T ss_pred CCEEEECHHHCCC--------CCHHHCHHHHHHHHHHHHHHHHHHHHHCCC--CEEECCCCCCCCCC---CCCCCCCHHH
T ss_conf 9999981031165--------327669999998872777999988885396--24551476644569---9845423777
Q ss_pred HHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHCCCCCHHHHHHHHHCCCC--------CCCCCHHHHHHHHHHHHCHHH
Q ss_conf 776314779984210858975622872685575079847999999826889--------987669999999998619887
Q gi|254780462|r 166 LESSTKYLACDYGGMNIRINAISAGPVRTLAGASISNGRDIAAWSKENSPL--------KRTVSLEDIGNSALYLLSYLS 237 (267)
Q Consensus 166 l~~ltr~lA~El~~~gIrVNaIaPG~i~T~~~~~~~~~~~~~~~~~~~~Pl--------~r~~~~edva~~v~fL~Sd~s 237 (267)
T Consensus 141 ~E~l~~~y~~~~~~~~~~~~~lR~fNVyGprgsVI---p~Fi~~~~~~~pi~I~dg~qtRdf~~V~D~v~~~l~a~~~-- 215 (280)
T pfam02719 141 AEKLFQAANRESGSGKTRFSAVRFGNVLGSRGSVI---PLFKKQIAEGGPVTVTHPDMTRFFMTIPEAVQLVLQAGAM-- 215 (280)
T ss_pred HHHHHHHHHHHHCCCCCEEEEEEECCEECCCCCCH---HHHHHHHHCCCCEEECCCCCEEEEEEHHHHHHHHHHHHHH--
T ss_conf 89999999997199985489875445028997709---9999999859986565998438558799999999999972--
Q ss_pred CCCCCCEEEECCCCCE
Q ss_conf 8878868998688443
Q gi|254780462|r 238 NGVTGEIHYVDCGYNI 253 (267)
Q Consensus 238 ~~iTGq~l~VDGG~s~ 253 (267)
T Consensus 216 -~~~geifnig~g~~~ 230 (280)
T pfam02719 216 -GKGGEIFVLDMGEPV 230 (280)
T ss_pred -CCCCCEEECCCCCCE
T ss_conf -877867888899866