RPSBLAST alignment of GI: 254780463 and SCOP domain: d1h2vc3

Alignment

 Score = 39.5 bits (92), Expect = 8e-04
 Identities = 30/219 (13%), Positives = 69/219 (31%), Gaps = 20/219 (9%)

Query: 99  KQIFNLLRKKLSNPHLQQHIESKTEQNGGIDPNLQSESLPTIPGTAIREDDDIDIFHSDM 158
             +    + K +N  +   ++     N   D +      P            I++F   +
Sbjct: 22  LCLAVAFKSKATNDEIFSILKDVPNPNQDDDDDEGFSFNPLK----------IEVFVQTL 71

Query: 159 AKL-SKSITELCRIISIPGIKKSHSQLEKILSKMENIAKECSLQSVENNWKGALQHFKKL 217
             L +KS +     ++     K H   + +    E   K   L+ +   W+   Q    L
Sbjct: 72  LHLAAKSFSHSFSALA-----KFHEVFKTLAESDE--GKLHVLRVMFEVWRNHPQMIAVL 124

Query: 218 DFKNLHEKINTLSCQMNVMQCTFDKNNNGFAASGIDEKLVSIVNSTHNLLSLLKLLNEKI 277
             K +  +I  + C          + +  F    + E L S +   +  +  ++   E+ 
Sbjct: 125 VDKMIRTQI--VDCAAVANWIFSSELSRDFTRLFVWEILHSTIRKMNKHVLKIQKELEEA 182

Query: 278 STKGVLSFDTKLSEIKTAVEKNRKYAQSYTQKFVEKFEK 316
             K       +  +   + ++     +   ++  EK E 
Sbjct: 183 KEKLARQHKRRSDDDDRSSDRKDGVLEEQIERLQEKVES 221

SCOP domain information

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: MIF4G domain-like
domain: CBP80, 80KDa nuclear cap-binding protein
species: Human (Homo sapiens) [TaxId: 9606]