HHsearch alignment for GI: 254780464 and conserved domain: pfam05193

>pfam05193 Peptidase_M16_C Peptidase M16 inactive domain. Peptidase M16 consists of two structurally related domains. One is the active peptidase, whereas the other is inactive. The two domains hold the substrate like a clamp.
Probab=99.95  E-value=4.9e-28  Score=206.98  Aligned_cols=174  Identities=33%  Similarity=0.540  Sum_probs=149.1

Q ss_pred             HHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCC-----CCCCCCCEE-EEECCCCCCCEE
Q ss_conf             00166776420112456630000025455122112211012358777788664-----223322102-330368432102
Q gi|254780464|r  165 SFTPEKIISFVSRNYTADRMYVVCVGAVDHEFCVSQVESYFNVCSVAKIKESM-----KPAVYVGGE-YIQKRDLAEEHM  238 (424)
Q Consensus       165 ~lt~~~l~~f~~~~y~p~n~~l~i~Gd~~~~~~~~~i~~~f~~~~~~~~~~~~-----~p~~~~~~~-~~~~~~~~~~~i  238 (424)
T Consensus         1 ~lt~e~l~~fy~~~Y~p~n~~l~i~Gdi~~~~~~~~i~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (182)
T pfam05193         1 SLTREDLKDFYKKHYSPDNMVLVVVGDVDLDELLALAEKYFGDLPASPPKPKPREPPLEPEELTGKEVVVPDKDVPQAKL   80 (182)
T ss_pred             CCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEE
T ss_conf             95989999999984782067999983999999999999997159988888887666766434677479992799862699


Q ss_pred             EECCCCCCCC-CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHH
Q ss_conf             3010000135-211356899877762487653222200026862101333222101220134442583024777877899
Q gi|254780464|r  239 MLGFNGCAYQ-SRDFYLTNILASILGDGMSSRLFQEVREKRGLCYSISAHHENFSDNGVLYIASATAKENIMALTSSIVE  317 (424)
Q Consensus       239 ~~~~~~~~~~-~~d~~al~ll~~iLg~g~sSrL~~~lRe~~glaY~v~s~~~~~~~~g~~~i~~~~~~~~~~~~~~~i~~  317 (424)
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~l~~lL~~~~~s~L~~~lr~~~gl~y~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~i~~  160 (182)
T pfam05193        81 ALAFPGPPLGNDPDSAALDVLAELLGGGASSRLFQELREKEGLAYSVSAFLDSYSDTGLFGIYADLDPENLDEVIELILE  160 (182)
T ss_pred             EEEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEEEEECCCCCEEEEEEEEECCCCHHHHHHHHHH
T ss_conf             99998488665588999999888725874437899998754880489986555889717999999787889999999999


Q ss_pred             HHHHHCC-CCCHHHHHHHHHHH
Q ss_conf             9985314-89989999999999
Q gi|254780464|r  318 VVQSLLE-NIEQREIDKECAKI  338 (424)
Q Consensus       318 ~i~~l~~-~i~~~el~~ak~~~  338 (424)
T Consensus       161 ~l~~l~~~g~s~~el~~ak~~l  182 (182)
T pfam05193       161 ELKKLAEEGITEEELERAKAQL  182 (182)
T ss_pred             HHHHHHHCCCCHHHHHHHHHCC
T ss_conf             9999987197999999999649