HHsearch results for GI: 254780464 and protein with PDBid: 1pp9_A
>1pp9_A Ubiquinol-cytochrome C reductase complex core protein I, mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron sulfur protein, cytochrome B; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_A* 1be3_A* 1l0n_A* 1ntk_A* 1ntm_A* 1ntz_A* 1nu1_A* 1l0l_A* 1ppj_A* 1sqq_A* 1sqv_A* 1sqx_A* 2a06_A* 2fyu_A* 1sqb_A* 1sqp_A* 1qcr_A* 1bcc_A* 2bcc_A* 3bcc_A* ...
Probab=98.50 E-value=4.3e-06 Score=58.41 Aligned_cols=165 Identities=12% Similarity=0.128 Sum_probs=106.2
Q ss_pred ECCCCCCCEEEECCCCCCCCCCH-HH-HHHHHHHHHHCCCCCC----CCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEE
Q ss_conf 03684321023010000135211-35-6899877762487653----222200026862101333222101220134442
Q gi|254780464|r 229 QKRDLAEEHMMLGFNGCAYQSRD-FY-LTNILASILGDGMSSR----LFQEVREKRGLCYSISAHHENFSDNGVLYIASA 302 (424)
Q Consensus 229 ~~~~~~~~~i~~~~~~~~~~~~d-~~-al~ll~~iLg~g~sSr----L~~~lRe~~glaY~v~s~~~~~~~~g~~~i~~~ 302 (424)
...+.+...+.+.+++.+..++. .. ...++.+++..|...+ +.+ ..+..|..+++++ ..-...++..
T Consensus 28 ~~~~~~~v~i~~~~~~Gs~~E~~~~~Glahllehm~f~Gt~~~~~~~~~~-~l~~~G~~~na~t------~~d~t~~~~~ 100 (446)
T 1pp9_A 28 EQSSQPTCTVGVWIDAGSRYESEKNNGAGYFVEHLAFKGTKNRPGNALEK-EVESMGAHLNAYS------TREHTAYYIK 100 (446)
T ss_dssp EECSCSEEEEEEEESCSGGGCCTTTTTHHHHHHHHTTSCBSSSTTTHHHH-HHHHTTCEEEEEE------CSSCEEEEEE
T ss_pred ECCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHH-HHHHCCCEEEEEE------CCCCEEEEEE
T ss_conf 76999979999998004556699974399999999728989999899999-9997199799998------6260899999
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHH--HHHHHHHCCC
Q ss_conf 58302477787789999853148998999999999999998513898999999999999689847989--9999887279
Q gi|254780464|r 303 TAKENIMALTSSIVEVVQSLLENIEQREIDKECAKIHAKLIKSQERSYLRALEISKQVMFCGSILCSE--KIIDTISAIT 380 (424)
Q Consensus 303 ~~~~~~~~~~~~i~~~i~~l~~~i~~~el~~ak~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~--~~~~~i~~vt 380 (424)
+.+++.+.+++.+.+.+..- .++++++++.|..++..+....+++...+.......++++.+.... -..+.|+++|
T Consensus 101 ~~~~~~~~~l~ll~~~~~~p--~f~~~~~~~ek~~v~~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~~~t 178 (446)
T 1pp9_A 101 ALSKDLPKAVELLADIVQNC--SLEDSQIEKERDVILQELQENDTSMRDVVFNYLHATAFQGTPLAQSVEGPSENVRKLS 178 (446)
T ss_dssp EEGGGHHHHHHHHHHHHHHB--CCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTSGGGSCSSCCHHHHHHCC
T ss_pred ECHHHHHHHHHHHHHHHHCC--CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCC
T ss_conf 77577777689999997667--8897998889999887652023581889999999986378974566867999997489
Q ss_pred HHHHHHHHHHHCCCCC-EEEEEE
Q ss_conf 8999999998627787-799981
Q gi|254780464|r 381 CEDIVGVAKKIFSSTP-TLAILG 402 (424)
Q Consensus 381 ~~di~~~~~~~l~~~~-~i~~vg 402 (424)
.++++++.++++.++. .++++|
T Consensus 179 ~~~l~~f~~~~y~p~n~~i~i~G 201 (446)
T 1pp9_A 179 RADLTEYLSRHYKAPRMVLAAAG 201 (446)
T ss_dssp HHHHHHHHHHHCCGGGEEEEEEE
T ss_pred HHHHHHHHHHHCCCCCEEEEEEC
T ss_conf 99999999871698735999736